INCATools / INCATools/boomer

accept SSSOM format

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#47 14 comments 0 reactions 0 assignees View on GitHub

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Dominant language
Scala
Stars
37
Forks
2
PR merge metrics
No merged PRs in 30d

Description

in addition to the ptable, also accept SSSOM mappings

cc @cmungall

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

The issue asks boomer to accept SSSOM mappings in addition to the existing ptable format. Start by locating the repository's ptable input handling and reviewing the issue discussion for format expectations. Done means SSSOM mappings are accepted alongside ptable input and the supported behavior is covered by the project's tests.

Written by the indexing model from the issue text.

Assessment

Tech stack
scala
Domain
data
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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