Owner

GLYCAM-Web

5 indexed repositories · View on GitHub

gmml
Glycam Molecular Modeling Library

C++ · 7 stars
website
A bare-bones repo to contain public website stuff and issues related to the GLYCAM Web Django apps.

HTML · 6 stars
gems
Glycam Extensible Modeling System

Python · 5 stars
MD_Utils

Shell · 2 stars
GLYCAM_Delegator_Docker
Standalone version of the molecular modeling engine used by GLYCAM-Web

Shell · 0 stars

Open All

Suspected Caching on Glycam Actual causing site to break. Open

bug

GLYCAM-Web/website#202 · 2 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
We need a contact us section on the website Open

docs feature

GLYCAM-Web/website#205 · 1 comment · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Ability to edit 'Repeating Unit' as text in the polybuilder Open

feature PB

GLYCAM-Web/website#206 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Glyfinder fails if you add an aglycon before a wildcard Open

bug GF

GLYCAM-Web/website#210 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 16, 2026
It is impossible to add derivatives in GF if you only add a single residue with wildcards. Open

bug GF

GLYCAM-Web/website#211 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Improvements for the build via text page Open

CB enhancement

GLYCAM-Web/website#213 · 0 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Observed bugs on Polybuilder on Actual Open

bug PB

GLYCAM-Web/website#214 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Polybuilder Needs Undo Open

feature PB

GLYCAM-Web/website#216 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Repeating unit syntax docs need to be improved Open

docs PB

GLYCAM-Web/website#230 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Website level tests should always check and pass on the sequences published in the CB paper Open

CB testing

GLYCAM-Web/website#237 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Add Captcha to Account creation process Open

feature

GLYCAM-Web/website#248 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
MDaaS should report to user when a job has timed out. Open

enhancement Error Handling MDaaS

GLYCAM-Web/website#253 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 16, 2026
GlycoMD / MDaaS is temporarily unavailable Open

GLYCAM-Web/website#255 · 0 comments · 0 reactions · 3 assignees · Indexed Sep 16, 2026
Main landing page needs updating Open

enhancement

GLYCAM-Web/website#256 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Link to repeat syntax docs Open

GLYCAM-Web/website#257 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
GP builder main page links Open

GP

GLYCAM-Web/website#258 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Cosmetic changes to GP Builder Open

enhancement GP

GLYCAM-Web/website#261 · 8 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Call for GP testing on LiveTest Open

call-for-comments

GLYCAM-Web/website#263 · 5 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Bacterial Builder 3D SNFG icons Open

BB enhancement

GLYCAM-Web/website#264 · 4 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Mol* not showing available minimized structure on carbohydrate builder download page Open

bug CB

GLYCAM-Web/website#265 · 4 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Enable download button even for failures Open

enhancement

GLYCAM-Web/website#267 · 1 comment · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Gp builder side loading from RCSB PDB Open

enhancement GP

GLYCAM-Web/website#270 · 0 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Gp builder: how does it deal with existing glycans? Open

GP

GLYCAM-Web/website#271 · 1 comment · 0 reactions · 2 assignees · Indexed Sep 16, 2026
PB Downloads Page Intermittently Missing Content Open

GLYCAM-Web/website#273 · 0 comments · 0 reactions · 3 assignees · Indexed Sep 16, 2026
Carbohydrate Sequence Build Downloads Sometimes Incomplete Open

GLYCAM-Web/website#274 · 1 comment · 0 reactions · 2 assignees · Indexed Sep 16, 2026
GAG Builder: Aglycon not available after monosaccharide 1 for hyaluronan and keratin / keratan sulfate Open

GLYCAM-Web/website#275 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
GlyFinder Multiple Issues on Display of Results Open

GLYCAM-Web/website#276 · 1 comment · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Site-Wide: Pre-existing User Accounts Unavailable Open

GLYCAM-Web/website#277 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Glycoprotein builder download page does not refresh with Firefox, works fine on Chrome. Windows OS. Open

bug GP

GLYCAM-Web/website#279 · 2 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Don't alter termini Open

feature GMML GP

GLYCAM-Web/website#281 · 8 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Carbohydrate Builder-2 issues Open

CB enhancement

GLYCAM-Web/website#282 · 5 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
bug in Password reset Open

GLYCAM-Web/website#283 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Evaluation returns for bad sequence rather than throwing an error Open

GLYCAM-Web/website#286 · 0 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026
Add way to link to info about artist in codename Open

GLYCAM-Web/website#288 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Is there any way to change the Phi, Psi, and Omega angle when creating the poly saccharide chain? Open

CB feature

GLYCAM-Web/website#289 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Glyfinder is returning nothing on actual Open

bug GF

GLYCAM-Web/website#291 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Guluronic Acid and Mannuronic Acid - Oliver Trunschke Open

CB feature GMML Science

GLYCAM-Web/website#292 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Gul is showing up in the linkage name on the options page for linkages in: DK3Opa2-4DKDOpa2-OH Open

BB bug CB

GLYCAM-Web/website#294 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Default torsion angles for DK3Opa2-4DKDOpa2-OH are bad. Open

BB bug CB

GLYCAM-Web/website#295 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Lactosamine repeats are not connected by 1-3, but instead by 1-4 Open

bug GP

GLYCAM-Web/website#298 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Gp builder tool giving error when file is not .pdb Open

enhancement GP

GLYCAM-Web/website#299 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
GP builder: some pdb files result in 400 error. Open

bug GP

GLYCAM-Web/website#300 · 4 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Error in creating an account and resetting the password Open

GLYCAM-Web/website#301 · 3 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Saving water in the md.in file. Open

enhancement

GLYCAM-Web/MD_Utils#2 · 4 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Need ability to set number of steps for workflow tests Open

enhancement

GLYCAM-Web/MD_Utils#4 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
Run_Multi-Part_Simulation.bash is in two places Open

invalid

GLYCAM-Web/MD_Utils#6 · 2 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
JSON API needs a Delegator class. Open

enhancement

GLYCAM-Web/gems#55 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 16, 2026
JSON API Research & Development Open

JSON API

GLYCAM-Web/gems#56 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 16, 2026
Need Dev doc for the Delegator class Open

enhancement JSON API

GLYCAM-Web/gems#57 · 1 comment · 0 reactions · 2 assignees · Indexed Sep 16, 2026
JSON API: the Marco and ListEntities services do not conform to schema Open

GLYCAM-Web/gems#77 · 0 comments · 0 reactions · 2 assignees · Indexed Sep 16, 2026

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