Owner
EpistasisLab
20 indexed repositories · View on GitHub
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tpot
A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.
Jupyter Notebook · 10051 stars
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pmlb
PMLB: A large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms.
Python · 873 stars
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KRAGEN
Software to implement GoT with a weviate vectorized database
Python · 681 stars
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scikit-rebate
A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.
Jupyter Notebook · 420 stars
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tpot2
⚠️ DEPRECATED. The work in this repository was merged into the main TPOT project as version 1.0. Please visit the active repository here:...
Jupyter Notebook · 250 stars
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Aliro
Aliro: AI-Driven Data Science
JavaScript · 238 stars
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ClinicalDataSources
Open or Easy Access Clinical Data Sources for Biomedical Research
194 stars
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scikit-mdr
A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
Python · 128 stars
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Python · 39 stars
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digen
Diverse and generative ML benchmarks
Jupyter Notebook · 18 stars
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3DHeatmap
3D Heatmap tool in Unity3D. Inst. for Biomed. Informatics, Univ. of PA
C# · 12 stars
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EcoXAI
Multiagent automated biomedical analysis framework. Fully AI harnessed agents generating hypotheses with testing and validation.
JavaScript · 8 stars
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Python · 6 stars
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ASAREE
A visual analytics platform for engineering, executing, and evaluating reproducible agentic AI teams using experimental design methods.
HTML · 6 stars
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Jupyter Notebook · 5 stars
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SAFE
The SAFE Algorithm: Solution and Fitness Evolution
Python · 4 stars
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PICV
Proportional instance cross validation
1 star
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Python · 1 star
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pennai-bioinformatics
Code to reproduce the experiments in "Evaluating recommender systems for AI-driven biomedical informatics"
Jupyter Notebook · 0 stars
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Python · 0 stars
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enhancement need contributor
EpistasisLab/tpot#59 · 4 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#104 · 18 comments · 0 reactions · 0 assignees ·
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enhancement question
EpistasisLab/tpot#105 · 17 comments · 1 reaction · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#139 · 1 comment · 1 reaction · 0 assignees ·
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question
EpistasisLab/tpot#152 · 44 comments · 0 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#171 · 13 comments · 0 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#195 · 9 comments · 1 reaction · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#196 · 2 comments · 1 reaction · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#204 · 6 comments · 4 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#207 · 11 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#265 · 7 comments · 1 reaction · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#282 · 2 comments · 0 reactions · 0 assignees ·
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being worked on enhancement
EpistasisLab/tpot#296 · 6 comments · 0 reactions · 1 assignee ·
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enhancement need contributor
EpistasisLab/tpot#298 · 3 comments · 1 reaction · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#304 · 24 comments · 4 reactions · 0 assignees ·
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Record the progress and auto disable the obviously slow candidate(never use in future trainning) Openenhancement need contributor
EpistasisLab/tpot#328 · 3 comments · 2 reactions · 0 assignees ·
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question
EpistasisLab/tpot#335 · 32 comments · 2 reactions · 0 assignees ·
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question
EpistasisLab/tpot#337 · 21 comments · 0 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#387 · 0 comments · 1 reaction · 0 assignees ·
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being worked on enhancement
EpistasisLab/tpot#394 · 0 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#449 · 12 comments · 0 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#452 · 18 comments · 0 reactions · 0 assignees ·
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TPOTEnsemble idea Openenhancement need contributor
EpistasisLab/tpot#479 · 9 comments · 4 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#504 · 7 comments · 0 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#507 · 21 comments · 2 reactions · 0 assignees ·
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being worked on bug
EpistasisLab/tpot#508 · 16 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#514 · 13 comments · 0 reactions · 0 assignees ·
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enhancement
EpistasisLab/tpot#523 · 0 comments · 0 reactions · 0 assignees ·
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SelectFromModel Openquestion
EpistasisLab/tpot#543 · 2 comments · 0 reactions · 0 assignees ·
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Imbalanced Learn? Openquestion
EpistasisLab/tpot#547 · 10 comments · 0 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#596 · 0 comments · 0 reactions · 0 assignees ·
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Keras built Networks Openquestion
EpistasisLab/tpot#602 · 6 comments · 2 reactions · 0 assignees ·
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need contributor question
EpistasisLab/tpot#608 · 1 comment · 0 reactions · 0 assignees ·
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enhancement need contributor
EpistasisLab/tpot#629 · 0 comments · 8 reactions · 0 assignees ·
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enhancement
EpistasisLab/tpot#632 · 10 comments · 0 reactions · 0 assignees ·
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enhancement question
EpistasisLab/tpot#640 · 8 comments · 3 reactions · 0 assignees ·
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question
EpistasisLab/tpot#645 · 17 comments · 0 reactions · 0 assignees ·
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TPOTClassifier.score() doesn't return the same value as TPOTClassifier.fitted_pipeline.score()? Openquestion
EpistasisLab/tpot#650 · 1 comment · 0 reactions · 0 assignees ·
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enhancement need contributor question
EpistasisLab/tpot#658 · 6 comments · 0 reactions · 0 assignees ·
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enhancement
EpistasisLab/tpot#660 · 4 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#664 · 9 comments · 0 reactions · 0 assignees ·
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enhancement
EpistasisLab/tpot#678 · 4 comments · 6 reactions · 0 assignees ·
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question
EpistasisLab/tpot#690 · 2 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#695 · 1 comment · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#706 · 3 comments · 0 reactions · 0 assignees ·
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enhancement
EpistasisLab/tpot#712 · 2 comments · 0 reactions · 0 assignees ·
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easy enhancement need contributor
EpistasisLab/tpot#729 · 2 comments · 0 reactions · 0 assignees ·
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enhancement
EpistasisLab/tpot#731 · 2 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#745 · 13 comments · 0 reactions · 0 assignees ·
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question
EpistasisLab/tpot#762 · 5 comments · 0 reactions · 0 assignees ·