Proprietario
DCAN-Labs
35 repository indicizzati · Vedi su GitHub
-
abcd-hcp-pipeline
bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
Python · 59 stelle
-
functional-random-forest
Functional Analysis with Random Forests
MATLAB · 22 stelle
-
MATLAB · 15 stelle
-
cifti-connectivity
Script to generate correlation matrices from BOLD dense or parcellated time series data.
MATLAB · 13 stelle
-
BIBSnet
This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can ...
Python · 13 stelle
-
dcan_bold_processing
functional connectivity preprocessing for resting state fMRI outputs of the dcan-fmri-pipelines
MATLAB · 9 stelle
-
file-mapper
An easy tool to copy/move/symlink files from one directory to the other!
Python · 8 stelle
-
infant-abcd-bids-pipeline
Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.
Python · 8 stelle
-
DCAN-HCP
The DCAN Lab's version of the minimal preprocessing pipeline for the Human Connectome Project
Shell · 7 stelle
-
nhp-abcd-bids-pipeline
Non-human primate (i.e., macaque) pipeline, based on abcd-hcp-pipeline, to process fMRI data.
Python · 6 stelle
-
movement_regressors_power_plots
Correction of respiratory artifacts in MRI head motion estimates
MATLAB · 5 stelle
-
abcd-bids-tfmri-pipeline
Pipeline to complete within-run and between-runs analyses of task-based fMRI dense timeseries data. This tool works with data that were m...
Python · 4 stelle
-
dcan-macaque-pipeline
The actual pipeline code, based on hcp, for non-human-primates - sp macaques.
Shell · 3 stelle
-
cdni-brain
readthedocs for CDNI collaborators and members
3 stelle
-
CABINET
CABINET is a utility that standardizes subsequent container execution. Emphasizing reproducibility, users can share JSONs to exactly repl...
Python · 1 stella
-
Python · 1 stella
-
SLURM_wrappers
Bash and Python wrappers for SLURM that streamline HPC job submission, AWS S3 data transfers, and disk-based workflows; adaptable to any ...
Shell · 1 stella
-
QSIPREP_HBCD_QC
Tool to make QC images for HBCD's QSIPREP Output
Python · 1 stella
-
Python · 1 stella
-
OSPREY_BIDS
Houses the Dockerfile used to compile OSPREY
Python · 1 stella
- 15 altri repository si trovano su Vedi su GitHub
-
documentation
DCAN-Labs/movement_regressors_power_plots#1 · 1 commento · 0 reazioni · 1 assegnatario ·
-
bug medium priority
DCAN-Labs/bids-tryworks#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement high priority
DCAN-Labs/bids-tryworks#3 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement
DCAN-Labs/bids-tryworks#4 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement
DCAN-Labs/bids-tryworks#5 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
bug enhancement
DCAN-Labs/bids-tryworks#6 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
duplicate enhancement
DCAN-Labs/bids-tryworks#7 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
bug enhancement
DCAN-Labs/bids-tryworks#8 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement
DCAN-Labs/bids-tryworks#9 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Move secret key to .env file Apertabug low priority
DCAN-Labs/bids-tryworks#10 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Update Documentation/SOP Apertadocumentation medium priority
DCAN-Labs/bids-tryworks#11 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement medium priority
DCAN-Labs/bids-tryworks#12 · 1 commento · 0 reazioni · 0 assegnatari ·
-
bug low priority
DCAN-Labs/bids-tryworks#13 · 2 commenti · 0 reazioni · 1 assegnatario ·
-
high priority question
DCAN-Labs/bids-tryworks#15 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
Clarity of search parameters Apertaenhancement question
DCAN-Labs/bids-tryworks#16 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement question
DCAN-Labs/bids-tryworks#17 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Exacloud compatibility? Apertaenhancement question
DCAN-Labs/bids-tryworks#18 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
bug help wanted high priority
DCAN-Labs/bids-tryworks#19 · 1 commento · 0 reazioni · 0 assegnatari ·
-
enhancement
DCAN-Labs/bids-tryworks#20 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
bug documentation good first issue
DCAN-Labs/bids-tryworks#21 · 8 commenti · 0 reazioni · 0 assegnatari ·
-
DCAN-Labs/bids-tryworks#22 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
DCAN-Labs/bids-tryworks#26 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Error if missing T2w Aperta
DCAN-Labs/daic2hcp#5 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
bug low priority
DCAN-Labs/dicom-harpooner#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
bug enhancement good first issue low priority
DCAN-Labs/dicom-harpooner#3 · 4 commenti · 0 reazioni · 1 assegnatario ·
-
Update Documentation Apertadocumentation low priority
DCAN-Labs/dicom-harpooner#8 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement medium priority
DCAN-Labs/dicom-harpooner#10 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement low priority
DCAN-Labs/dicom-harpooner#11 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement medium priority
DCAN-Labs/dicom-harpooner#13 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
DCAN-Labs/cifti-connectivity#1 · 1 commento · 0 reazioni · 0 assegnatari ·
-
DCAN-Labs/cifti-connectivity#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
DCAN-Labs/cifti-connectivity#3 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
DCAN-Labs/cifti-connectivity#4 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement
DCAN-Labs/CustomClean#4 · 0 commenti · 0 reazioni · 2 assegnatari ·
-
Change all global variables into local variables passed between functions in cleaning_script.py Apertaenhancement
DCAN-Labs/CustomClean#5 · 0 commenti · 0 reazioni · 2 assegnatari ·
-
enhancement
DCAN-Labs/CustomClean#7 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
polish script Aperta
DCAN-Labs/ABCC-participants#1 · 2 commenti · 0 reazioni · 1 assegnatario ·
-
dir_search_scripts Aperta
DCAN-Labs/MSI-utilities#2 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
error_query Aperta
DCAN-Labs/MSI-utilities#3 · 0 commenti · 0 reazioni · 2 assegnatari ·
-
find_and_replace Aperta
DCAN-Labs/MSI-utilities#4 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
get_max_fairshare Aperta
DCAN-Labs/MSI-utilities#5 · 2 commenti · 0 reazioni · 1 assegnatario ·
-
misc_bash_utilities_jacob Aperta
DCAN-Labs/MSI-utilities#6 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
modify_zip Aperta
DCAN-Labs/MSI-utilities#7 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
query_cubids_errors Aperta
DCAN-Labs/MSI-utilities#8 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
s3_get_x500 Aperta
DCAN-Labs/MSI-utilities#9 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
session_tsv_maker Aperta
DCAN-Labs/MSI-utilities#10 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
sync_verify Aperta
DCAN-Labs/MSI-utilities#11 · 1 commento · 0 reazioni · 1 assegnatario ·
-
add data stewards Aperta
DCAN-Labs/MSI-utilities#12 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
DCAN-Labs/MSI-utilities#13 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
list_manipulation Aperta
DCAN-Labs/MSI-utilities#14 · 0 commenti · 0 reazioni · 1 assegnatario ·