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CROCODILE-CESM

8 indexed repositories · View on GitHub

CrocoDash
A software package setting up regional MOM6 in the CESM. Check out our documentation!

Python · 15 stars
CrocoGallery
The Tutorials, Gallery, & Use Cases of CrocoDash. See it on the website!

Jupyter Notebook · 6 stars
model2obs
Tools for model-obs comparison (and possibly model-model comparison)

Python · 1 star
workshop25-hack-projects
A place to collect possible DA/model obs comparison projects for the 2025 CROCODILE workshop

0 stars
git-lecture-2025
Lecture slides for learning Git and collaborative workflows. Presented as part of the 2025 CROCODILE workshop

CSS · 0 stars
DA_notebook

0 stars
dartobsgen
A pip-installable Python package that generates DART obs_seq files from pluggable observation data sources.

Python · 0 stars
Bask
Template repo for generating your own ocean model with CrocoDash, and analyse it with CrocoCamp and CUPiD

Shell · 0 stars

Open All

MOM6 data assimilation script for CESM3 Open

Bash enhancement Python

CROCODILE-CESM/workshop25-hack-projects#1 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Ingest observations from NNJA and convert to DART observation sequence format Open

enhancement Observations Python

CROCODILE-CESM/workshop25-hack-projects#2 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Create a multi-instance version of CrocoDash Open

CrocoDash enhancement

CROCODILE-CESM/workshop25-hack-projects#3 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
CESM Hybrid multi-instance run Open

bug CESM CIME Python

CROCODILE-CESM/workshop25-hack-projects#4 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Configure DART as a CESM component Open

CIME enhancement Python

CROCODILE-CESM/workshop25-hack-projects#5 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
pyDARTdiags example DA notebook for MOM6/CICE DA Open

enhancement Python

CROCODILE-CESM/workshop25-hack-projects#6 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
add issue creating to talk Open

CROCODILE-CESM/git-lecture-2025#1 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
colors are wrong in one of the slides -fork vs clone Open

CROCODILE-CESM/git-lecture-2025#2 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
state diagnostics Open

CROCODILE-CESM/DA_notebook#3 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Observation space diagnostics Open

dart-diags

CROCODILE-CESM/DA_notebook#4 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Initial run takes ~40 minutes, JRA forccing Open

cesm

CROCODILE-CESM/DA_notebook#5 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
observation error variance for CrocoLake Open

observations

CROCODILE-CESM/DA_notebook#6 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
should pydartdiags obs seq writer be used to remove unused types? Open

CROCODILE-CESM/DA_notebook#7 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Tutorials Open

CROCODILE-CESM/DA_notebook#10 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
cesm replay.sh does not track changes in the python only the xmlchange Open

CROCODILE-CESM/DA_notebook#13 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
MOM6 diagnostics Open

CROCODILE-CESM/DA_notebook#14 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
add da packages to crocodash env Open

CROCODILE-CESM/DA_notebook#15 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Need to perturb in the example Open

CROCODILE-CESM/DA_notebook#16 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add info on setting number of tasks Open

CROCODILE-CESM/DA_notebook#17 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
NNJA to observation sequence Open

CROCODILE-CESM/dartobsgen#1 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Raise error if calendar not Gregorian Open

CROCODILE-CESM/model2obs#20 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Move tutorial data to different storage service Open

CROCODILE-CESM/model2obs#33 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
[feature] Add viz for model-obs 1D fit plot Open

CROCODILE-CESM/model2obs#35 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add ROMS integration Open

CROCODILE-CESM/model2obs#41 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add missing support for `workflow.run()` arguments for ROMS models Open

CROCODILE-CESM/model2obs#46 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add support for `trim_obs` in ROMS Open

enhancement

CROCODILE-CESM/model2obs#47 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add support for `no_matching` in ROMS Open

enhancement

CROCODILE-CESM/model2obs#48 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add support for `force_obs_time` in ROMS Open

enhancement

CROCODILE-CESM/model2obs#49 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add documentation beyond README Open

CROCODILE-CESM/model2obs#50 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Move ModelAdapters instance attrbutes to class attributes Open

enhancement good first issue

CROCODILE-CESM/model2obs#51 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add ROMS tutorial data to cloud and download Open

CROCODILE-CESM/model2obs#52 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add support for CICE Open

CROCODILE-CESM/model2obs#61 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add custom input.nml field-value pairs Open

CROCODILE-CESM/model2obs#72 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Improve pre-matching speed Open

CROCODILE-CESM/model2obs#77 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
clean_output=True does not clean all output Open

CROCODILE-CESM/model2obs#81 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
model2obs tutorial data take a lot of time to download Open

CROCODILE-CESM/Bask#9 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
ncks missing in model2obs env Open

CROCODILE-CESM/Bask#10 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
add conda env removal to clean.sh Open

CROCODILE-CESM/Bask#11 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Move packages one level up Open

CROCODILE-CESM/Bask#14 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Freeze packages and data for 2026 Crocodile workshop Open

CROCODILE-CESM/Bask#15 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add DA version of CESM Open

CROCODILE-CESM/Bask#19 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add mom6-tools and remove CUPiD Open

CROCODILE-CESM/Bask#23 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Add `module load conda` for casper/derecho systems. Open

CROCODILE-CESM/Bask#24 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add additional description for get_glorys_data Open

CROCODILE-CESM/CrocoGallery#34 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Demos/Workflow for regridding bathymetry and using external tools Open

CROCODILE-CESM/CrocoGallery#37 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Fixtures - State.py can be merged with VisualCaseGen fixtures Open

enhancement

CROCODILE-CESM/CrocoDash#59 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
[Feature request] Get IC and OBCs from "unified BGC dataset" compiled from obs and model-based sources Open

CROCODILE-CESM/CrocoDash#123 · 1 comment · 1 reaction · 0 assignees · Indexed Sep 15, 2026
MARBL BGC Data for the Great Lakes? Open

CROCODILE-CESM/CrocoDash#132 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
General Tidal Data Input Open

CROCODILE-CESM/CrocoDash#133 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Benchmark Large Data Workflow and Bathymetry Regridding Open

CROCODILE-CESM/CrocoDash#137 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026

CROCODILE-CESM

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