BlueBrain / BlueBrain/NeuroMorphoVis

Allow editing morphology section types

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#203 0 comments 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
138
Forks
27
PR merge metrics
No merged PRs in 30d

Description

Sometimes, a given morphology is not annotated correctly and it is therefore necessary to rename some of the branches' section type. If we can have this feature in neuromorphoviz, that would be great. A sample morphology can be found in https://ml-neuronbrowser.janelia.org/ where all dendrites are annotated as basal.

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by locating the morphology annotation and editing workflow in NeuroMorphoVis, then inspect the sample morphology at https://ml-neuronbrowser.janelia.org/. The work is complete when a user can rename the section type of selected morphology branches, including changing basal dendrites to another type.

Written by the indexing model from the issue text.

Assessment

Tech stack
blender, python
Domain
computer-graphics, desktop
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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