BlueBrain / BlueBrain/NeuroMorphoVis
Allow exporting after section removal
- Dominant language
- Python
- Stars
- 138
- Forks
- 27
- PR merge metrics
- No merged PRs in 30d
Description
For a given morphology , especially with new full brain reconstructions, we need to be able to subsample or edit morphologies. One example is Mouselight morphologies where axons are so wide, its not possible to use it on local circuit building in tools for in-silico circuit building. For that , I edited the morphology and removed the unnecessary regions but current version of neuromorphoviz cannot export the edited morphology, only traslocation of nodes are allowed.
Would be great to have that so we can utilize Allen and Mouselight morphologies
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by locating the morphology editing workflow and the existing export entry point, then trace how removed sections are represented before export. The work is done when a morphology edited by removing unnecessary regions can be exported, in addition to morphologies with only node translations.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- computer-graphics
- Issue type
- Feature
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 38/100