BlueBrain / BlueBrain/BluePyMM

Allow for in-place changing of parameters

Open
#55 0 comments 0 reactions 0 assignees View on GitHub
enhancement
Dominant language
Python
Stars
13
Forks
9
PR merge metrics
No merged PRs in 30d

Description

At the moment BluePyMM assumes every e-model has a fixed set of parameters, and it discards all the morphologies that don't work with this parameter set.
We should allow the e-model package to return a new set of parameters for each morphology, so that it can e.g. run an optimization to fine-tune the parameters.

Contributor guide

No contributing guide indexed for this repository

Research direction

No files or tests are named. Start by tracing how BluePyMM receives e-model parameters and filters morphologies that do not match the fixed parameter set. The work is done when an e-model package can return morphology-specific parameters and those morphologies are processed without being discarded.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
tooling
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
25/100

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