BergelsonLab / BergelsonLab/blabpy
do not merge with basic level data on NA annotid
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bug
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- Python
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Description
This creates spurious messages about duplicate annotids when the sparse_code csv contains multiple rows without annotid.
Minimally: break before `tmp = old_df[old_df[annotid_col] == annot_id]` in `blabpy.seedlings.merge` if annotid is missing.
Better: rewrite the whole thing as a join.
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