BergelsonLab / BergelsonLab/blabpy

deal with non-empty folder errors when running make_updated_basic_level_files

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#13 0 comments 0 reactions 1 assignee Claimed by @kalenkovich View on GitHub
enhancement
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Python
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Description

1. Ignore `.DS_Store`.
2. Check for the connection to PN-OPUS early so that folders are not created before we find out that there we can't access PN-OPUS and abort. Because currently a folder *is* created and on the second invocation the script aborts because the working folder is not empty anymore.

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