Proprietario
AllenNeuralDynamics
236 repository indicizzati · Vedi su GitHub
-
aind-ephys-pipeline
AIND pipeline for processing extracellular electrophysiology data
Nextflow · 41 stelle
-
aind-data-schema
A library that defines AIND data schema and validates JSON.
Python · 34 stelle
-
openscope-community-predictive-processing
This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Proce...
Python · 26 stelle
-
aind-ephys-spikesort-kilosort25-full
CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
Python · 14 stelle
-
aind-large-scale-cellpose
Large-scale cell segmentation with cellpose.
Python · 10 stelle
-
Rhapso
An open-source Python toolkit for large-scale fluorescence microscopy data alignment and fusion.
Python · 9 stelle
-
dynamic-foraging-task
Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control
Python · 7 stelle
-
aind-smartspim-pipeline
Repository that hosts the SmartSPIM pipeline code
Nextflow · 6 stelle
-
TigerASI
a lightweight python interface for ASI brand Tiger Controllers
Python · 5 stelle
-
wavpack-numcodecs
Numcodecs implementation of the WavPack audio codec
C · 5 stelle
-
anivia
Fork of VGG VIA to better support annotation of animal pose images
JavaScript · 4 stelle
-
harp.device.treadmill-driver
0326: a Harp-compatible device for controlling an instrumented mouse treadmill
Jupyter Notebook · 4 stelle
-
voxel-classic
General purpose microscope control repository
Python · 4 stelle
-
view
Model/View for exa-spim
Python · 4 stelle
-
harp.device.lickety-split
0360: an ephys-compliant capacitive lick detector
C++ · 4 stelle
-
runze-control
Python Driver for Aurora Pro Scientific (aka Runze Fluid) syringe pumps
Python · 4 stelle
-
parallax
Automatic detection of probe position from multiple camera views
Python · 4 stelle
-
aind-SmartSPIM-segmentation
segmentation module for SmartSPIM cloud pipeline
Python · 4 stelle
-
aind-smartspim-stitch
Stitching and fusion pipeline in the cloud
Python · 4 stelle
-
aind-smartspim-ccf-registration
Registration of lightsheet whole brain images to the Allen CCF V3 Atlas
Python · 4 stelle
- 216 altri repository si trovano su Vedi su GitHub
-
AllenNeuralDynamics/aind-data-transfer-lite#23 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-data-transfer-lite#29 · 5 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-data-transfer-lite#31 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/aind-data-transfer-lite#33 · 3 commenti · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/aind-data-transfer-lite#34 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
enhancement
AllenNeuralDynamics/aind-large-scale-cellpose#2 · 1 commento · 1 reazione · 1 assegnatario ·
-
enhancement
AllenNeuralDynamics/aind-large-scale-cellpose#7 · 0 commenti · 0 reazioni · 2 assegnatari ·
-
AllenNeuralDynamics/aind-large-scale-cellpose#11 · 1 commento · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/aind-large-scale-cellpose#13 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
blocked
AllenNeuralDynamics/voxel-classic#9 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/voxel-classic#14 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Refactor stage class Aperta
AllenNeuralDynamics/voxel-classic#25 · 1 commento · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/voxel-classic#27 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
Change start behavior of DAQ Aperta
AllenNeuralDynamics/voxel-classic#29 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/voxel-classic#36 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
FilterWheel Refactor Aperta
AllenNeuralDynamics/voxel-classic#45 · 1 commento · 0 reazioni · 1 assegnatario ·
-
Refactor DAQ Driver Aperta
AllenNeuralDynamics/voxel-classic#71 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/voxel-classic#72 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/allen-powerplatform-client#15 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/allen-powerplatform-client#21 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-smartspim-transform-utils#4 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/AutoTomeQC#4 · 1 commento · 0 reazioni · 1 assegnatario ·
-
Train CNN model for Image QC Apertaenhancement
AllenNeuralDynamics/AutoTomeQC#5 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
GUI Aperta
AllenNeuralDynamics/AutoTomeQC#27 · 1 commento · 0 reazioni · 1 assegnatario ·
-
Use log-schema Aperta
AllenNeuralDynamics/AutoTomeQC#29 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-dynamic-foraging-qc#29 · 2 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-dynamic-foraging-qc#30 · 1 commento · 0 reazioni · 0 assegnatari ·
-
Electrical artifact details Aperta
AllenNeuralDynamics/aind-dynamic-foraging-qc#31 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Harp timestamp gaps Aperta
AllenNeuralDynamics/aind-dynamic-foraging-qc#32 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Upgrade QC to metadata V2 Aperta
AllenNeuralDynamics/aind-dynamic-foraging-qc#37 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
bug
AllenNeuralDynamics/aind-dynamic-foraging-qc#44 · 2 commenti · 0 reazioni · 1 assegnatario ·
-
Release package to pypi Aperta
AllenNeuralDynamics/aind-hcr-data-transformation#15 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-hcr-data-transformation#22 · 1 commento · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/aind-hcr-data-transformation#32 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
Update processing to v2 Aperta
AllenNeuralDynamics/aind-hcr-data-transformation#33 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/Aind.Behavior.IsoForce#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/Aind.Behavior.IsoForce#3 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/Aind.Behavior.IsoForce#10 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Show touch signals Aperta
AllenNeuralDynamics/Aind.Behavior.IsoForce#11 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-hcr-data-loader#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-hcr-data-loader#5 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/aind-ephys-spikesort-kilosort4#12 · 2 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/CTL-conditioned-mean-response#1 · 4 commenti · 0 reazioni · 0 assegnatari ·
-
add logging module Aperta
AllenNeuralDynamics/aind-capsule-template#14 · 1 commento · 0 reazioni · 1 assegnatario ·
-
automatic versioning Aperta
AllenNeuralDynamics/aind-capsule-template#15 · 0 commenti · 0 reazioni · 1 assegnatario ·
-
AllenNeuralDynamics/LCNE-patchseq-analysis#28 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
Publication-standards Aperta
AllenNeuralDynamics/LCNE-patchseq-analysis#29 · 3 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/LC-somatodendritic-morphology#1 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/device-spinner#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
-
AllenNeuralDynamics/device-spinner#5 · 0 commenti · 0 reazioni · 0 assegnatari ·