AllenNeuralDynamics / AllenNeuralDynamics/aind-metadata-mapper

Update SmartSPIM acquisition to accommodate laser calibration

Abierto
#343 0 comentarios 0 reacciones 1 asignado Reclamado por @miketaormina Ver en GitHub
Lenguaje dominante
Python
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0
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2
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1 d 7 h
PR fusionados (30 d)
1

Descripción

SmartSPIM data sets now include a laser calibration file that maps the "percentage" power setting to a measured value in milliWatts.

Add functionality:

## smartspim.acquisition.utils:
- [ ] function to find/load calibration data
- [ ] function to interpolate calibration data to value that comes from metadata.txt/.json
- [ ] `make_tile_acq_channel()` function applies calibrated value to each tile based on side left/right, laser, setting
- [ ] Ensure that, in the event this calibration file does not exist, fall back to default behavior

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