AllenNeuralDynamics/aind-dynamic-foraging-data-utils

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Tools for the analysis of behavior and neural data from the dynamic foraging task

Stars: 2
Forks: 0
Open beginner issues: 0
Indexed issues: 20
Avg merge: 1d 10h
Merged PRs (30d): 3

Dominant language: Python
License: MIT
Last GitHub push: Sep 2, 2026
Latest indexed: Sep 13, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed

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20 open issues indexed

Planning: standardized dynamic foraging analysis Open

planning

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#16 · 11 comments · 0 reactions · 4 assignees · Indexed Sep 13, 2026
Move foraging_efficiency calculations to aind-dynamic-foraging-basic-analysis Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#28 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
nwb_utils.create_df_session needs to be reorganized Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#30 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Add tests for nwb_utils Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#31 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
fip_df access should check for old NWB processing and warn users Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#45 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
No reward trials somehow still have reward_time listed Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#52 · 7 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Documentation needs Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#53 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Have Extra Rewards defined by Manual reward and AutoReward Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#54 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Organize columns in df_trials to be more logically ordered Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#55 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Have assert tests give more information about what failed Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#56 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Reorganize reward delivery times Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#57 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Add modularity to `get_foraging_model_info` Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#66 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Add session information when pulling df_sessions Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#86 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Should Z-scoring exclude the FIP baseline period? Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#103 · 7 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
dependency aind_analysis_arch_result_access not in requirements Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#119 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Add tests for python versions 3.11 to 3.14 Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#125 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
create_df_events includes all acquisition information. Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#128 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 13, 2026
add NWB combine tool Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#138 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
docDB/Code Ocean: multiple processed assets per (subject, date) for some dynamic-foraging sessions Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#146 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Add list for "load_fip" so it doesn't load all of the FIP Open

AllenNeuralDynamics/aind-dynamic-foraging-data-utils#165 · 4 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026

AllenNeuralDynamics/aind-dynamic-foraging-data-utils

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