AllenNeuralDynamics / AllenNeuralDynamics/aind-dynamic-foraging-data-utils

No reward trials somehow still have reward_time listed

Open
#52 7 comments 0 reactions 1 assignee Claimed by @rachelstephlee View on GitHub
Dominant language
Python
Stars
2
Forks
0
Avg merge
1d 10h
Merged PRs (30d)
3

Description

Related to the https://github.com/AllenNeuralDynamics/aind-dynamic-foraging-data-utils/issues/49, sometimes unrewarded trials will have a reward_time listed.

This is found by:
```
buggy_trials = nwb.df_trials[(nwb.df_trials['reward'] == 0) & (~np.isnan(nwb.df_trials['reward_time']))]

buggy_trials[['reward', 'animal_response', 'reward_time', 'reward_outcome_time']]
```

Note that the `animal_response` isn't 2, which means no response, for these trials, so isn't that the animal didn't respond and somehow got a reward_time recorded.

The trials that have this issue drop dramatically if we use the correct goCue timing for t0 in https://github.com/AllenNeuralDynamics/aind-dynamic-foraging-data-utils/issues/49.

Bug was found originally in mouse 705599, session 2024-06-27_12-22-52, data asset ID: 659b036d-a469-477d-ba62-95b81e2aac43

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.