AllenCell / AllenCell/benchmarking_representations

Rewrite confusing model training instructions

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#87 0 条评论 0 个 reaction 已指派 1 人 已被 @ritvikvasan 认领 在 GitHub 查看
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描述

These instructions in USAGE.md confused me
> Create a single cell manifest (e.g. csv, parquet) for each dataset with a column corresponding to final processed paths, and create a split column corresponding to train/test/validation split.
Update the final single cell dataset path (SINGLE_CELL_DATASET_PATH) and the column in the manifest for appropriate input modality (SDF_COLUMN/SEG_COLUMN/POINTCLOUD_COLUMN/IMAGE_COLUMN) in each [datamodule file](https://github.com/AllenCell/benchmarking_representations/blob/main/configs/data). e.g. for PCNA data these yaml files are located here -

We should rewrite. (Discussed specifics in person)

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