waldronlab/imageFeatureTCGA

Stars: 2
Forks: 1
Open beginner issues: 0
Indexed issues: 8

Dominant language: R
License: No license data
Last GitHub push: Jul 13, 2026
Latest indexed: Sep 20, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: help wanted
PR merge metrics: No merged PRs in 30d

Beginner friendly Everything

Open All

8 open issues indexed

h5ad compression Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

waldronlab/imageFeatureTCGA#46 · 2 comments · Opened Mar 9, 2026
update catalog to include all data Open

waldronlab/imageFeatureTCGA#41 · 1 assignee · Opened Jan 21, 2026
upload remaining cancers, e.g., TCGA-BRCA to cancerdatasci.org Open

waldronlab/imageFeatureTCGA#39 · 2 assignees · Opened Jan 20, 2026
data provenance Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

waldronlab/imageFeatureTCGA#37 · Opened Jan 20, 2026
Convert provgigapath embeddings to parquet by slide/tile Open

enhancement help wanted

Difficulty 4/5 3-5 days Newbie friendliness 42/100

waldronlab/imageFeatureTCGA#32 · 2 reactions · Opened Jan 10, 2026
Functionality for summarizing hovernet data to bounding boxes, like image tiles. Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

waldronlab/imageFeatureTCGA#27 · Opened Dec 9, 2025
Establish and maintain hovernet and provgigapath data in r2 cloud bucket using rclone Open

waldronlab/imageFeatureTCGA#16 · 1 assignee · Opened Nov 25, 2025
Functions to calculate slide-level summary statistics of HoVer-Net output Open

waldronlab/imageFeatureTCGA#7 · 1 comment · 1 assignee · Opened Nov 13, 2025

A short digest of beginner-friendly GitHub issues.