Owner

vmikk

1 indexed repository · View on GitHub

NextITS
A pipeline for metabarcoding fungi and other eukaryotes with full-length ITS sequenced with PacBio

R · 14 stars

Beginner friendly Everything

Open All

rename issue in nextflow Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

vmikk/NextITS#16 · 1 comment · Opened Aug 20, 2026
Running with ITS region set to ITS1_5.8S_ITS2 fails on documentation step Open

bug

vmikk/NextITS#13 · 7 comments · 1 assignee · Opened Oct 26, 2025
secondary analysis Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

vmikk/NextITS#5 · 8 comments · Opened Apr 17, 2024

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