tidyomics/tidySummarizedExperiment

Brings SummarizedExperiment to the tidyverse

Stars: 31
Forks: 7
Open beginner issues: 0
Indexed issues: 4
Avg merge: 42m
Merged PRs (30d): 1

Dominant language: R
License: No license data
Last GitHub push: Aug 20, 2026
Latest indexed: Sep 19, 2026
Contributing guide: Contributing guide
Code of conduct: Code of conduct
Beginner labels: No beginner labels indexed

Beginner friendly Everything

Open All

4 open issues indexed

`filter()` cannot access colData columns with non-syntactic names Open

tidyomics/tidySummarizedExperiment#124 · 1 comment · 2 reactions · 2 assignees · Opened Aug 17, 2026
feature request: Aggregate by a variable in rowData or colData Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

tidyomics/tidySummarizedExperiment#115 · 1 reaction · Opened Dec 4, 2025
Tidy operations with `tidySE` when `colData` and `rowData` share column names Open

bug

tidyomics/tidySummarizedExperiment#76 · 6 comments · 1 assignee · Opened Jul 21, 2023
Implement `group_by` and `with_groups` for `tidySummarizedExperiment` Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 15/100

tidyomics/tidySummarizedExperiment#75 · 1 comment · Opened Jul 20, 2023

A short digest of beginner-friendly GitHub issues.