Owner

ssciwr

38 indexed repositories · View on GitHub

clang-format-wheel
clang-format python wheels

CMake · 111 stars
cookiecutter-cpp-project
A cookiecutter for a C++ Project with lots of configuration options

Python · 66 stars
clang-tidy-wheel
clang-tidy python wheels

Python · 28 stars
ipywidgets-jsonschema
A widget generator for your Jupyter notebooks

Python · 22 stars
AMMICO
AI-based Media and Misinformation Content Analysis Tool: Analyze text and images

Python · 16 stars
doxygen-install
GitHub Action to install Doxygen

Shell · 15 stars
cookiecutter-python-package
A cookiecutter for a Python project with lots of configuration options

Python · 14 stars
hammingdist
Calculates pairwise distances between gene sequences given in fasta format

C++ · 12 stars
cpp-performance-profiling
Performance profiling C++ applications [SSC Compact Course]

C++ · 11 stars
lunch-time-python
Get together and learn about different python libraries.

Jupyter Notebook · 10 stars
nbclick
Turn Jupyter notebooks into command line applications

Jupyter Notebook · 9 stars
sphinx_lfs_content
Ensure existence of LFS data in Sphinx builds e.g. on ReadTheDocs

Python · 9 stars
project-W
A self-hostable platform on which users can create transcripts of their audio files (speech-to-text) using Whisper AI

Python · 7 stars
jupyter-slides-template
Jupyter notebook that renders as html slides

Jupyter Notebook · 6 stars
precommend

Python · 6 stars
afwizard
Adaptive Filtering Wizard

Python · 5 stars
mondey
MONDEY: Milestones of Normal Development in Early Years

Python · 3 stars
BioStructureHub
Bio-Structure Hub at SSC.

Jupyter Notebook · 3 stars
organelle-morphology
Quantification of organelle morphology from EM data.

Python · 2 stars
mailcom
Recognize and pseudonymize named entities in emails

Python · 2 stars
18 more repositories live on View on GitHub

Beginner friendly Everything

Open All

decide fate of integration test scripts Open

Difficulty 5/5 Over a week Newbie friendliness 30/100

ssciwr/heiplanet-models#76 · Opened Sep 18, 2026
Unify logging and logging library Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/heiplanet-models#75 · Opened Sep 18, 2026
"Before shared start time" warning shows incorrectly in Alignment GUI tab Open

ssciwr/body-eye-sync#63 · 1 assignee · Opened Sep 11, 2026
check different methods for using top-k face/body embeddings Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/body-eye-sync#60 · 1 comment · Opened Sep 11, 2026
Publish wheel for clang-tidy v23.1.1 Open

Difficulty 3/5 1-2 days Newbie friendliness 48/100

ssciwr/clang-tidy-wheel#129 · 2 reactions · Opened Sep 10, 2026
GUI option to run all models Open

Difficulty 3/5 1-2 days Newbie friendliness 68/100

ssciwr/body-eye-sync#55 · Opened Sep 8, 2026
gaze definition: padding of face area Open

Difficulty 5/5 Over a week Newbie friendliness 30/100

ssciwr/body-eye-sync#54 · Opened Sep 8, 2026
user flow / consistent state Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/body-eye-sync#52 · Opened Sep 7, 2026
Generation without reasoning not correctly displayed on the frontend Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

ssciwr/papyri-assistant#30 · Opened Sep 7, 2026
Avoid infinite LLM loops Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

ssciwr/papyri-assistant#29 · 2 comments · Opened Sep 7, 2026
Add XPath-based search Open

Difficulty 4/5 3-5 days Newbie friendliness 48/100

ssciwr/papyri-assistant#28 · Opened Sep 7, 2026
Qualified Keywords Open

Difficulty 3/5 1-2 days Newbie friendliness 65/100

ssciwr/scrapyrus#16 · Opened Sep 7, 2026
update data model to indicate predator and prey Open

Difficulty 2/5 1-3 hours Newbie friendliness 68/100

ssciwr/sentinel-rat-dashboard#7 · Opened Sep 7, 2026
Try embedding keywords Open

suggestion

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/papyri-assistant#25 · 2 comments · Opened Sep 4, 2026
Expose scrapyrus semantic catalog to the agent Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/papyri-assistant#24 · 2 comments · Opened Sep 2, 2026
Automate deployment of container image updates Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/biocypher-components-registry#70 · Opened Sep 2, 2026
store image info into db when a new image copied in the watched folder Open

Difficulty 4/5 3-5 days Newbie friendliness 52/100

ssciwr/sentinel-rat-pipeline#6 · Opened Sep 2, 2026
Use main branches for all repos when setup Open

Difficulty 2/5 1-3 hours Newbie friendliness 65/100

ssciwr/sentinel-rat#1 · Opened Sep 1, 2026
update script according to the new data model Open

Difficulty 3/5 1-2 days Newbie friendliness 48/100

ssciwr/sentinel-rat-pipeline#5 · Opened Sep 1, 2026
Prepare mock data Open

Difficulty 3/5 1-2 days Newbie friendliness 50/100

ssciwr/sentinel-rat-dashboard#6 · Opened Sep 1, 2026
CI on Windows and MacOS Open

Difficulty 2/5 1-3 hours Newbie friendliness 72/100

ssciwr/heiplanet-data#137 · Opened Sep 1, 2026
Make it possible to query multiple embedding tables Open

enhancement user-interaction

Difficulty 4/5 3-5 days Newbie friendliness 45/100

ssciwr/papyri-assistant#21 · Opened Aug 31, 2026
Agentic Workspace registry-integrated UI Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

ssciwr/biocypher-components-registry#67 · 2 comments · Opened Aug 29, 2026
Reintroduce safetensors export Open

enhancement Trainer

Difficulty 3/5 1-2 days Newbie friendliness 55/100

ssciwr/GalaxySpectrumClassifier#34 · Opened Aug 28, 2026
Epoch exports can be unreadable by the public loaders if using unsafe elements Open

bug Trainer

Difficulty 3/5 1-2 days Newbie friendliness 74/100

ssciwr/GalaxySpectrumClassifier#33 · Opened Aug 28, 2026
Calling EpochTrainer.train() again after a partial run discards the prior run Open

bug Trainer

Difficulty 3/5 1-2 days Newbie friendliness 76/100

ssciwr/GalaxySpectrumClassifier#32 · Opened Aug 28, 2026
Updated dashboard design options Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/sentinel-rat-dashboard#5 · 1 comment · Opened Aug 28, 2026
Direct callable support is currently broken despite being documented; dotted paths work Open

bug Trainer

ssciwr/GalaxySpectrumClassifier#31 · 1 assignee · Opened Aug 28, 2026
Add limits/configure limits for secure sandboxing of the AI agent Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/biocypher-components-registry#66 · 1 comment · Opened Aug 28, 2026
Decide on API / Auth Token for Agentic Workspace Open

Difficulty 5/5 Over a week Newbie friendliness 30/100

ssciwr/biocypher-components-registry#65 · Opened Aug 28, 2026
Address how to make run_command available to prevent information exposure beyond this users workspace Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/biocypher-components-registry#64 · Opened Aug 28, 2026
Agentic Workspace Security Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/biocypher-components-registry#63 · Opened Aug 28, 2026
Integration tests Open

suggestion testing and verification

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/papyri-assistant#19 · Opened Aug 27, 2026
Add logging layer to establish tractability of behavior Open

enhancement suggestion

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/papyri-assistant#18 · Opened Aug 27, 2026
Implement evidence verification layer Open

enhancement suggestion

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/papyri-assistant#17 · Opened Aug 27, 2026
[Usage Bug] Proper context compactification and context management Open

user-interaction

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/papyri-assistant#16 · Opened Aug 27, 2026
Put workflows and expertise about working with papyri into agent skills Open

enhancement task

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/papyri-assistant#15 · 1 comment · Opened Aug 27, 2026
[Usage Bug] No proper text wrapping in frontend Open

user-interaction

Difficulty 3/5 1-2 days Newbie friendliness 45/100

ssciwr/papyri-assistant#13 · 1 comment · Opened Aug 27, 2026
Make user stories into bdd-style tests Open

suggestion testing and verification

Difficulty 4/5 3-5 days Newbie friendliness 48/100

ssciwr/papyri-assistant#11 · Opened Aug 27, 2026
mark detected animal as predator or prey Open

Difficulty 3/5 1-2 days Newbie friendliness 55/100

ssciwr/sentinel-rat-dashboard#4 · Opened Aug 26, 2026
Lazy loading heavy/optional dependencies Open

Difficulty 2/5 1-3 hours Newbie friendliness 68/100

ssciwr/heiplanet-data#134 · Opened Aug 25, 2026
Gospel Open

user-story

Difficulty 4/5 3-5 days Newbie friendliness 35/100

ssciwr/papyri-assistant#10 · Opened Aug 21, 2026
[User Story] Open

user-story

Difficulty 4/5 3-5 days Newbie friendliness 45/100

ssciwr/papyri-assistant#9 · Opened Aug 21, 2026
[User Story] Open

user-story

Difficulty 5/5 Over a week Newbie friendliness 38/100

ssciwr/papyri-assistant#8 · Opened Aug 21, 2026
Libelli Open

user-story

Difficulty 5/5 Over a week Newbie friendliness 25/100

ssciwr/papyri-assistant#7 · Opened Aug 21, 2026
[User Story] Open

user-story

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/papyri-assistant#6 · Opened Aug 21, 2026
Paleography Open

user-story

Difficulty 4/5 3-5 days Newbie friendliness 45/100

ssciwr/papyri-assistant#5 · Opened Aug 21, 2026
support videos split into multiple files Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 35/100

ssciwr/body-eye-sync#47 · 1 comment · Opened Aug 21, 2026
support raw tobii data folders Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 52/100

ssciwr/body-eye-sync#46 · 1 comment · 1 reaction · Opened Aug 21, 2026
Simplify tests Open

Dataset enhancement tests Trainer

Difficulty 4/5 3-5 days Newbie friendliness 35/100

ssciwr/GalaxySpectrumClassifier#29 · Opened Aug 14, 2026

Showing the newest 100

This page lists what was indexed most recently. Advanced filter has the whole inventory, narrowed by language, difficulty and how long a task takes.

Open advanced filter

ssciwr

Showing the newest 100

Get new issues in your inbox