scverse/liana

LIANA+: an all-in-one framework for cell-cell communication

Beginner friendly Everything

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10 open issues indexed

v2.0.0 release on PyPI requires owner change Open

bug

scverse/liana#275 · 2 comments · 2 assignees · Opened Sep 13, 2026
CrossTalkeR versioning issues for CI Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

scverse/liana#271 · 1 reaction · Opened Sep 9, 2026
AttributeError: module 'liana' has no attribute 'pp' Open

bug

Difficulty 2/5 1-3 hours Newbie friendliness 55/100

scverse/liana#270 · 7 comments · Opened Sep 7, 2026
Feature request: API to aggregate MISTy results across samples and plot condition contrasts (parity with mistyR) Open

enhancement

scverse/liana#208 · 1 comment · 1 assignee · Opened Aug 29, 2025
Add a tutorial on GPU-accelerated misty Open

enhancement

scverse/liana#100 · 1 assignee · Opened Apr 12, 2024
Frequency Chord diagram and Heatmap in Python Open

enhancement

scverse/liana#85 · 12 comments · 1 assignee · Opened Jan 31, 2024
move LIANA+ plots to matplotlib and seaborn? [User Opinons Welcome] Open

enhancement

scverse/liana#83 · 6 comments · 1 reaction · 1 assignee · Opened Jan 26, 2024
Implement GPU to speed up the CCC caculation in process of rank_aggregate method (CellChat part)? Open

enhancement

scverse/liana#78 · 3 comments · 1 assignee · Opened Dec 19, 2023
Add aggregate function for MISTy models (extend plots) Open

enhancement

scverse/liana#56 · 3 comments · 1 assignee · Opened Sep 7, 2023
Set scanpy as a "common" dependency Open

scverse/liana#40 · 1 assignee · Opened Jul 27, 2023

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