RtStruct saved from nifti appears rotated.
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Description
Hello everyone, I'm trying to export a nii segmentation file in a RTSTRUCT-DICOM file.
The ROIs in DICOM appear rotated.
The dataset I have from https://nbia.cancerimagingarchive.net (CT/ Whole Body).
The CTs with the created RTSTRUCT I have loaded into https://dicom-web-viewer-b4139.web.app/ (they must be in the same folder)
I've attached the screenshots and the nii segmentation file.
vertebre.nii.gz
Anyway,
Great Job
Michel
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Research direction
Use the attached vertebre.nii.gz with the referenced NBIA CT dataset and load the generated RTSTRUCT alongside the CTs in the DICOM web viewer. Compare the ROI orientation and trace the NIfTI-to-RTSTRUCT conversion path; done means the exported ROIs align with the CTs rather than appearing rotated.
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Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100