plotly / plotly/plotly.R

Shiny/crosstalk barchart highlight adds bards

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#2,139 3 comentarios 0 reacciones 0 asignados Ver en GitHub

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Descripción

Trying to make a linked bar chart that links with other charts using crosstalk and shiny.
Issue: When clicking the plot, it stacks on top instead of just highlighting
image

RStudio cloud project with app for reprex https://rstudio.cloud/project/4071604

Shiny Example:

library(shiny)
library(crosstalk)
#> 
#> Attaching package: 'crosstalk'
#> The following object is masked from 'package:shiny':
#> 
#>     getDefaultReactiveDomain
library(plotly)
#> Loading required package: ggplot2
#> 
#> Attaching package: 'plotly'
#> The following object is masked from 'package:ggplot2':
#> 
#>     last_plot
#> The following object is masked from 'package:stats':
#> 
#>     filter
#> The following object is masked from 'package:graphics':
#> 
#>     layout
library(dplyr)
#> 
#> Attaching package: 'dplyr'
#> The following objects are masked from 'package:stats':
#> 
#>     filter, lag
#> The following objects are masked from 'package:base':
#> 
#>     intersect, setdiff, setequal, union
library(ggplot2)

# fake names
df = tibble::tribble(
  ~provider, ~n_total_visit,      ~Type, ~n_visit,
  "Dr. Robert Lyons",           315L,  "No Show",     142L,
  "Dr. Robert Lyons",           315L, "Occurred",     175L,
  "Dr. Alexander Augustine",           336L,  "No Show",     122L,
  "Dr. Alexander Augustine",           336L, "Occurred",     217L,
  "Dr. Alisia Valenzuela",           308L,  "No Show",     102L,
  "Dr. Alisia Valenzuela",           308L, "Occurred",     215L
)
df = df %>%
  mutate(utilization = n_visit / n_total_visit)
df = df %>%
  select(provider, utilization, Type) %>%
  mutate(Type = factor(Type, levels = c("Occurred", "No Show")))

ui <- fluidPage(
  titlePanel(title = ""),
  sidebarLayout(
    sidebarPanel(),
    mainPanel(
      plotlyOutput("utilization_by_provider", width = "100%"),
      plotlyOutput("gg", width = "100%")
    )
  )
)

server = function(input, output) {
  df = crosstalk::SharedData$new(df, key = ~ provider)

  output$utilization_by_provider = renderPlotly({
    fig = df %>%
      plot_ly(
        x = ~ provider,
        y = ~ utilization,
        color = ~ Type,
        type = "bar"
      ) %>%
      layout(
        barmode = 'stack'
      ) %>%
      highlight()

    fig
  })

  output$gg = renderPlotly({
    fig = df %>%
      ggplot(aes(x = provider, y= utilization, fill = Type)) +
      geom_bar(stat = "identity", position = "stack")
    fig = ggplotly(fig) %>%
      highlight()

    fig
  })

}

shinyApp(ui = ui, server = server)
#> 
#> Listening on http://127.0.0.1:4992
#> Warning in RColorBrewer::brewer.pal(N, "Set2"): minimal value for n is 3, returning requested palette with 3 different levels

#> Warning in RColorBrewer::brewer.pal(N, "Set2"): minimal value for n is 3, returning requested palette with 3 different levels
#> Setting the `off` event (i.e., 'plotly_doubleclick') to match the `on` event (i.e., 'plotly_click'). You can change this default via the `highlight()` function.
#> Setting the `off` event (i.e., 'plotly_doubleclick') to match the `on` event (i.e., 'plotly_click'). You can change this default via the `highlight()` function.
#> Setting the `off` event (i.e., 'plotly_doubleclick') to match the `on` event (i.e., 'plotly_click'). You can change this default via the `highlight()` function.
#> Setting the `off` event (i.e., 'plotly_doubleclick') to match the `on` event (i.e., 'plotly_click'). You can change this default via the `highlight()` function.

Created on 2022-05-19 by the reprex package (v2.0.1)

Session info
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.1.1 (2021-08-10)
#>  os       Ubuntu 20.04.3 LTS
#>  system   x86_64, linux-gnu
#>  ui       X11
#>  language (EN)
#>  collate  en_US.UTF-8
#>  ctype    en_US.UTF-8
#>  tz       Etc/UTC
#>  date     2022-05-19
#>  pandoc   2.14.0.3 @ /usr/lib/rstudio-server/bin/pandoc/ (via rmarkdown)
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package      * version    date (UTC) lib source
#>  assertthat     0.2.1      2019-03-21 [1] RSPM (R 4.1.0)
#>  bslib          0.3.1      2021-10-06 [1] RSPM (R 4.1.0)
#>  cachem         1.0.6      2021-08-19 [1] RSPM (R 4.1.0)
#>  callr          3.7.0      2021-04-20 [1] RSPM (R 4.1.0)
#>  cli            3.3.0      2022-04-25 [1] RSPM (R 4.1.0)
#>  colorspace     2.0-3      2022-02-21 [1] RSPM (R 4.1.0)
#>  crayon         1.5.1      2022-03-26 [1] RSPM (R 4.1.0)
#>  crosstalk    * 1.2.0      2021-11-04 [1] CRAN (R 4.1.1)
#>  curl           4.3.2      2021-06-23 [1] RSPM (R 4.1.0)
#>  data.table     1.14.2     2021-09-27 [1] RSPM (R 4.1.0)
#>  DBI            1.1.2      2021-12-20 [1] RSPM (R 4.1.0)
#>  digest         0.6.29     2021-12-01 [1] RSPM (R 4.1.0)
#>  dplyr        * 1.0.8      2022-02-08 [1] RSPM (R 4.1.0)
#>  ellipsis       0.3.2      2021-04-29 [1] RSPM (R 4.1.0)
#>  evaluate       0.15       2022-02-18 [1] RSPM (R 4.1.0)
#>  fansi          1.0.3      2022-03-24 [1] RSPM (R 4.1.0)
#>  farver         2.1.0      2021-02-28 [1] RSPM (R 4.1.0)
#>  fastmap        1.1.0      2021-01-25 [1] RSPM (R 4.1.0)
#>  fs             1.5.2      2021-12-08 [1] RSPM (R 4.1.0)
#>  generics       0.1.2      2022-01-31 [1] RSPM (R 4.1.0)
#>  ggplot2      * 3.3.5      2021-06-25 [1] RSPM (R 4.1.0)
#>  glue           1.6.2      2022-02-24 [1] RSPM (R 4.1.0)
#>  gtable         0.3.0      2019-03-25 [1] RSPM (R 4.1.0)
#>  highr          0.9        2021-04-16 [1] RSPM (R 4.1.0)
#>  htmltools      0.5.2      2021-08-25 [1] RSPM (R 4.1.0)
#>  htmlwidgets    1.5.4      2021-09-08 [1] RSPM (R 4.1.0)
#>  httpuv         1.6.5      2022-01-05 [1] RSPM (R 4.1.0)
#>  httr           1.4.2      2020-07-20 [1] RSPM (R 4.1.0)
#>  jquerylib      0.1.4      2021-04-26 [1] RSPM (R 4.1.0)
#>  jsonlite       1.8.0      2022-02-22 [1] RSPM (R 4.1.0)
#>  knitr          1.39       2022-04-26 [1] RSPM (R 4.1.0)
#>  labeling       0.4.2      2020-10-20 [1] RSPM (R 4.1.0)
#>  later          1.3.0      2021-08-18 [1] RSPM (R 4.1.0)
#>  lazyeval       0.2.2      2019-03-15 [1] CRAN (R 4.1.1)
#>  lifecycle      1.0.1      2021-09-24 [1] RSPM (R 4.1.0)
#>  magrittr       2.0.3      2022-03-30 [1] RSPM (R 4.1.0)
#>  mime           0.12       2021-09-28 [1] RSPM (R 4.1.0)
#>  munsell        0.5.0      2018-06-12 [1] RSPM (R 4.1.0)
#>  pillar         1.7.0      2022-02-01 [1] RSPM (R 4.1.0)
#>  pkgconfig      2.0.3      2019-09-22 [1] RSPM (R 4.1.0)
#>  plotly       * 4.10.0     2021-10-09 [1] CRAN (R 4.1.1)
#>  processx       3.5.3      2022-03-25 [1] RSPM (R 4.1.0)
#>  promises       1.2.0.1    2021-02-11 [1] RSPM (R 4.1.0)
#>  ps             1.7.0      2022-04-23 [1] RSPM (R 4.1.0)
#>  purrr          0.3.4      2020-04-17 [1] RSPM (R 4.1.0)
#>  R.cache        0.15.0     2021-04-30 [1] RSPM (R 4.1.0)
#>  R.methodsS3    1.8.1      2020-08-26 [1] RSPM (R 4.1.0)
#>  R.oo           1.24.0     2020-08-26 [1] RSPM (R 4.1.0)
#>  R.utils        2.11.0     2021-09-26 [1] RSPM (R 4.1.0)
#>  R6             2.5.1      2021-08-19 [1] RSPM (R 4.1.0)
#>  RColorBrewer   1.1-3      2022-04-03 [1] RSPM (R 4.1.0)
#>  Rcpp           1.0.8.3    2022-03-17 [1] RSPM (R 4.1.0)
#>  reprex         2.0.1      2021-08-05 [1] RSPM (R 4.1.0)
#>  rlang          1.0.2      2022-03-04 [1] RSPM (R 4.1.0)
#>  rmarkdown      2.14       2022-04-25 [1] RSPM (R 4.1.0)
#>  rstudioapi     0.13       2020-11-12 [1] RSPM (R 4.1.0)
#>  sass           0.4.1      2022-03-23 [1] RSPM (R 4.1.0)
#>  scales         1.2.0      2022-04-13 [1] RSPM (R 4.1.0)
#>  sessioninfo    1.2.2.9000 2022-04-08 [1] Github (r-lib/sessioninfo@27965c2)
#>  shiny        * 1.7.1      2021-10-02 [1] RSPM (R 4.1.0)
#>  stringi        1.7.6      2021-11-29 [1] RSPM (R 4.1.0)
#>  stringr        1.4.0      2019-02-10 [1] RSPM (R 4.1.0)
#>  styler         1.7.0      2022-03-13 [1] RSPM (R 4.1.0)
#>  tibble         3.1.6      2021-11-07 [1] RSPM (R 4.1.0)
#>  tidyr          1.2.0      2022-02-01 [1] RSPM (R 4.1.0)
#>  tidyselect     1.1.2      2022-02-21 [1] RSPM (R 4.1.0)
#>  utf8           1.2.2      2021-07-24 [1] RSPM (R 4.1.0)
#>  vctrs          0.4.1      2022-04-13 [1] RSPM (R 4.1.0)
#>  viridisLite    0.4.0      2021-04-13 [1] RSPM (R 4.1.0)
#>  webshot        0.5.2      2019-11-22 [1] RSPM (R 4.1.0)
#>  withr          2.5.0      2022-03-03 [1] RSPM (R 4.1.0)
#>  xfun           0.30       2022-03-02 [1] RSPM (R 4.1.0)
#>  xml2           1.3.3      2021-11-30 [1] RSPM (R 4.1.0)
#>  xtable         1.8-4      2019-04-21 [1] RSPM (R 4.1.0)
#>  yaml           2.3.5      2022-02-21 [1] RSPM (R 4.1.0)
#> 
#>  [1] /usr/local/lib/R/site-library
#>  [2] /usr/local/lib/R/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────

Just Plotly Example:

library(shiny)
library(crosstalk)
#> 
#> Attaching package: 'crosstalk'
#> The following object is masked from 'package:shiny':
#> 
#>     getDefaultReactiveDomain
library(plotly)
#> Loading required package: ggplot2
#> 
#> Attaching package: 'plotly'
#> The following object is masked from 'package:ggplot2':
#> 
#>     last_plot
#> The following object is masked from 'package:stats':
#> 
#>     filter
#> The following object is masked from 'package:graphics':
#> 
#>     layout
library(dplyr)
#> 
#> Attaching package: 'dplyr'
#> The following objects are masked from 'package:stats':
#> 
#>     filter, lag
#> The following objects are masked from 'package:base':
#> 
#>     intersect, setdiff, setequal, union
library(ggplot2)

# fake names
df = tibble::tribble(
  ~provider, ~n_total_visit,      ~Type, ~n_visit,
  "Dr. Robert Lyons",           315L,  "No Show",     142L,
  "Dr. Robert Lyons",           315L, "Occurred",     175L,
  "Dr. Alexander Augustine",           336L,  "No Show",     122L,
  "Dr. Alexander Augustine",           336L, "Occurred",     217L,
  "Dr. Alisia Valenzuela",           308L,  "No Show",     102L,
  "Dr. Alisia Valenzuela",           308L, "Occurred",     215L
)
df = df %>%
  mutate(utilization = n_visit / n_total_visit)
df = df %>%
  select(provider, utilization, Type) %>%
  mutate(Type = factor(Type, levels = c("Occurred", "No Show")))

df = crosstalk::SharedData$new(df, key = ~ provider)

fig = df %>%
  plot_ly(
    x = ~ provider,
    y = ~ utilization,
    color = ~ Type,
    type = "bar"
  ) %>%
  layout(
    barmode = 'stack'
  ) %>%
  highlight()

Created on 2022-05-19 by the reprex package (v2.0.1)

Session info
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.1.1 (2021-08-10)
#>  os       Ubuntu 20.04.3 LTS
#>  system   x86_64, linux-gnu
#>  ui       X11
#>  language (EN)
#>  collate  en_US.UTF-8
#>  ctype    en_US.UTF-8
#>  tz       Etc/UTC
#>  date     2022-05-19
#>  pandoc   2.14.0.3 @ /usr/lib/rstudio-server/bin/pandoc/ (via rmarkdown)
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package     * version    date (UTC) lib source
#>  assertthat    0.2.1      2019-03-21 [1] RSPM (R 4.1.0)
#>  cli           3.3.0      2022-04-25 [1] RSPM (R 4.1.0)
#>  colorspace    2.0-3      2022-02-21 [1] RSPM (R 4.1.0)
#>  crayon        1.5.1      2022-03-26 [1] RSPM (R 4.1.0)
#>  crosstalk   * 1.2.0      2021-11-04 [1] CRAN (R 4.1.1)
#>  data.table    1.14.2     2021-09-27 [1] RSPM (R 4.1.0)
#>  DBI           1.1.2      2021-12-20 [1] RSPM (R 4.1.0)
#>  digest        0.6.29     2021-12-01 [1] RSPM (R 4.1.0)
#>  dplyr       * 1.0.8      2022-02-08 [1] RSPM (R 4.1.0)
#>  ellipsis      0.3.2      2021-04-29 [1] RSPM (R 4.1.0)
#>  evaluate      0.15       2022-02-18 [1] RSPM (R 4.1.0)
#>  fansi         1.0.3      2022-03-24 [1] RSPM (R 4.1.0)
#>  fastmap       1.1.0      2021-01-25 [1] RSPM (R 4.1.0)
#>  fs            1.5.2      2021-12-08 [1] RSPM (R 4.1.0)
#>  generics      0.1.2      2022-01-31 [1] RSPM (R 4.1.0)
#>  ggplot2     * 3.3.5      2021-06-25 [1] RSPM (R 4.1.0)
#>  glue          1.6.2      2022-02-24 [1] RSPM (R 4.1.0)
#>  gtable        0.3.0      2019-03-25 [1] RSPM (R 4.1.0)
#>  highr         0.9        2021-04-16 [1] RSPM (R 4.1.0)
#>  htmltools     0.5.2      2021-08-25 [1] RSPM (R 4.1.0)
#>  htmlwidgets   1.5.4      2021-09-08 [1] RSPM (R 4.1.0)
#>  httpuv        1.6.5      2022-01-05 [1] RSPM (R 4.1.0)
#>  httr          1.4.2      2020-07-20 [1] RSPM (R 4.1.0)
#>  jsonlite      1.8.0      2022-02-22 [1] RSPM (R 4.1.0)
#>  knitr         1.39       2022-04-26 [1] RSPM (R 4.1.0)
#>  later         1.3.0      2021-08-18 [1] RSPM (R 4.1.0)
#>  lazyeval      0.2.2      2019-03-15 [1] CRAN (R 4.1.1)
#>  lifecycle     1.0.1      2021-09-24 [1] RSPM (R 4.1.0)
#>  magrittr      2.0.3      2022-03-30 [1] RSPM (R 4.1.0)
#>  mime          0.12       2021-09-28 [1] RSPM (R 4.1.0)
#>  munsell       0.5.0      2018-06-12 [1] RSPM (R 4.1.0)
#>  pillar        1.7.0      2022-02-01 [1] RSPM (R 4.1.0)
#>  pkgconfig     2.0.3      2019-09-22 [1] RSPM (R 4.1.0)
#>  plotly      * 4.10.0     2021-10-09 [1] CRAN (R 4.1.1)
#>  promises      1.2.0.1    2021-02-11 [1] RSPM (R 4.1.0)
#>  purrr         0.3.4      2020-04-17 [1] RSPM (R 4.1.0)
#>  R.cache       0.15.0     2021-04-30 [1] RSPM (R 4.1.0)
#>  R.methodsS3   1.8.1      2020-08-26 [1] RSPM (R 4.1.0)
#>  R.oo          1.24.0     2020-08-26 [1] RSPM (R 4.1.0)
#>  R.utils       2.11.0     2021-09-26 [1] RSPM (R 4.1.0)
#>  R6            2.5.1      2021-08-19 [1] RSPM (R 4.1.0)
#>  Rcpp          1.0.8.3    2022-03-17 [1] RSPM (R 4.1.0)
#>  reprex        2.0.1      2021-08-05 [1] RSPM (R 4.1.0)
#>  rlang         1.0.2      2022-03-04 [1] RSPM (R 4.1.0)
#>  rmarkdown     2.14       2022-04-25 [1] RSPM (R 4.1.0)
#>  rstudioapi    0.13       2020-11-12 [1] RSPM (R 4.1.0)
#>  scales        1.2.0      2022-04-13 [1] RSPM (R 4.1.0)
#>  sessioninfo   1.2.2.9000 2022-04-08 [1] Github (r-lib/sessioninfo@27965c2)
#>  shiny       * 1.7.1      2021-10-02 [1] RSPM (R 4.1.0)
#>  stringi       1.7.6      2021-11-29 [1] RSPM (R 4.1.0)
#>  stringr       1.4.0      2019-02-10 [1] RSPM (R 4.1.0)
#>  styler        1.7.0      2022-03-13 [1] RSPM (R 4.1.0)
#>  tibble        3.1.6      2021-11-07 [1] RSPM (R 4.1.0)
#>  tidyr         1.2.0      2022-02-01 [1] RSPM (R 4.1.0)
#>  tidyselect    1.1.2      2022-02-21 [1] RSPM (R 4.1.0)
#>  utf8          1.2.2      2021-07-24 [1] RSPM (R 4.1.0)
#>  vctrs         0.4.1      2022-04-13 [1] RSPM (R 4.1.0)
#>  viridisLite   0.4.0      2021-04-13 [1] RSPM (R 4.1.0)
#>  withr         2.5.0      2022-03-03 [1] RSPM (R 4.1.0)
#>  xfun          0.30       2022-03-02 [1] RSPM (R 4.1.0)
#>  xtable        1.8-4      2019-04-21 [1] RSPM (R 4.1.0)
#>  yaml          2.3.5      2022-02-21 [1] RSPM (R 4.1.0)
#> 
#>  [1] /usr/local/lib/R/site-library
#>  [2] /usr/local/lib/R/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────

Guía de contribución

Abrir la guía de contribución

Primeros pasos

  1. Lee el issue completo y luego la guía de contribución del proyecto.
  2. Comenta en el issue que vas a ocuparte — evita que dos personas hagan lo mismo.
  3. Haz un fork del repositorio y trabaja en una rama.
  4. Abre un pull request que haga referencia al número del issue.

Línea de trabajo

Empieza ejecutando los ejemplos proporcionados de Shiny y Plotly independiente, centrándote en el gráfico de barras plot_ly con barmode = 'stack' y highlight(). Compara el gráfico seleccionado con el comportamiento esperado de highlight mostrado en las capturas de pantalla; se considera terminado cuando hacer clic en una barra la resalta sin añadir ni apilar barras adicionales, en ambos ejemplos.

Escrito por el modelo de indexación a partir del texto del issue.

Evaluación

Stack tecnológico
plotly, r
Área
data-visualization
Tipo de issue
Error
Dificultad
4/5
Tiempo estimado
3-5 días
Estado de actividad
Estancado
Claridad
Bastante claro
Aptitud para principiantes
35/100

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