pepkit / pepkit/pephub

Validation of huge (>10K samples) projects

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enhancement
Dominant language
TypeScript
Stars
22
Forks
2
PR merge metrics
No merged PRs in 30d

Description

Project validation currently happens on the fly while updating (editing) the sample table/configuration.

For large projects, this causes small delays, making project editing less smooth and responsive.

One possible solution is to validate large projects on demand. For example, if a project contains more than 10K samples, the validation button would appear grayed out, indicating that the project has not yet been validated. Once the button is clicked, Pephub would run the validation process for that project.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by tracing project validation during sample table or configuration updates and locating the validation button and process. Define how projects over 10K samples are marked unvalidated and how explicit validation is triggered; done means editing remains responsive and the button clearly reflects validation state.

Written by the indexing model from the issue text.

Assessment

Tech stack
typescript
Domain
full-stack
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Quiet
Clarity
Mostly clear
Newbie friendliness
48/100

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