ome / ome/ngff

FAQ: what are ways to transition to NGFFs?

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#166 3 comments 0 reactions 0 assignees View on GitHub

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documentation
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Python
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Description

"For a lab that has a lot of data, is there any way to transition gradually to NGFF"

  • Run a service that exposes NGFF (e.g., OMERO)
  • Pre-process data to "look like" NGFF (kerchunk)
  • Convert data on a temporary basis to scratch
  • ... suggestions welcome

Thanks to @keller-mark for the question!

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First steps

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  3. Fork the repository and make your change on a branch.
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Research direction

Start with the FAQ content related to issue #166 and review the listed approaches, including the linked kerchunk project. Determine which gradual-transition options are supported and agreed upon, then update the FAQ with the final guidance and verify that the links and wording are accurate.

Written by the indexing model from the issue text.

Assessment

Domain
documentation
Issue type
Documentation
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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