obophenotype / obophenotype/ncbitaxon

add namespace

Open
#8 1 comment 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
Python
Stars
31
Forks
7
PR merge metrics
No merged PRs in 30d

Description

@cmungall would it be possible to add the namespace to the header of the ncbi taxon file? our loaders are unable to load without the namespace.

thanks,
Yvonne

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Locate the NCBI taxon file and the loaders that consume it. Check how the file header is generated or packaged, then verify that adding the namespace allows the loaders to load the file successfully.

Written by the indexing model from the issue text.

Assessment

Domain
data
Issue type
Feature
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.