nf-core / nf-core/variantprioritization

Considering moving the sample-specific parameters to samplesheet

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@YussAb is already working on this.

Since May 21, 2026.

  • #96 by @HomoPolyethylen — merged
enhancement
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Description

Description of feature

Hi,

I think it is wise to have the sample-specific parameters in the samplesheet.csv to make this pipeline ready for analyzing several patients same time.

Sample-specific parameters --tumor_ploidy, --tumor_purity, --tumor_site and of-course --sex
These parametes change by patients, and therefore it has be in the sample-sheet

See here

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