nf-core / nf-core/scdownstream
Implement scPred cell type assignment
Open
Nobody has claimed this yet.
enhancement
NBIS
- Dominant language
- Nextflow
- Stars
- 115
- Forks
- 66
- Avg merge
- 11d 6h
- Merged PRs (30d)
- 4
Description
Has been implemented in YASCP
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the existing scPred cell type assignment implementation in YASCP and determine how it relates to this scdownstream issue. Confirm whether the work should be reproduced here; done would mean scdownstream provides the requested assignment consistently with the YASCP implementation.
Written by the indexing model from the issue text.
Assessment
- Domain
- machine-learning
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 15/100