nf-core / nf-core/magmap

Add "instrain"?

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#184 1 comment 0 reactions 0 assignees View on GitHub

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enhancement
Dominant language
Nextflow
Stars
12
Forks
6
Avg merge
1d 7h
Merged PRs (30d)
8

Description

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading the linked instrain README, then inspect the magmap workflow entry points to determine where the requested integration would fit. Done means the scope and expected behavior are defined and the instrain functionality is integrated into the pipeline with its behavior verified.

Written by the indexing model from the issue text.

Assessment

Domain
bioinformatics
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Quiet
Clarity
Needs clarification
Newbie friendliness
35/100

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