Dataset for GWAS development
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help wanted
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- Dominant language
- Nextflow
- Stars
- 28
- Forks
- 28
- PR merge metrics
- No merged PRs in 30d
Description
We need to find a good dataset for testing the implementation of the pipeline.
This issue stems from a discussion documented here https://github.com/nf-core/gwas/issues/16#issuecomment-1030649162
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with the discussion linked from issue #16, especially the referenced comment, to understand what dataset the GWAS pipeline needs for testing. Identify a suitable dataset and confirm that it supports the pipeline's implementation tests; the issue is complete when the dataset choice and its testing suitability are documented.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100