nf-core / nf-core/drop

track changes in scripts vs. snakemake pipelines

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#73 3 comments 0 reactions 0 assignees View on GitHub

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Dominant language
Nextflow
Stars
14
Forks
9
PR merge metrics
No merged PRs in 30d

Description

Both snakemake and nf-drop pipeline are still under developing. For a smooth transfer, it is good to document and track changes in nf-drop vs snakemake pipeline.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No file, test, or entry point is named. Start by comparing the snakemake and nf-drop pipelines, then document their differences and transfer-relevant changes; done means the comparison is clear and kept up to date.

Written by the indexing model from the issue text.

Assessment

Domain
data-engineering, documentation
Issue type
Documentation
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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