neurostuff / neurostuff/PyMARE

Parameter alpha (`q`) is not being used by the FDR correction method

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bug
Dominant language
Python
Stars
58
Forks
16
Avg merge
5h 7m
Merged PRs (30d)
4

Description

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start in pymare/stats.py at the linked lines 178-188 and trace how fdr receives and applies q. Search for existing fdr tests or callers to determine the expected correction behavior, then verify that changing q changes the result without breaking current behavior.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data
Issue type
Bug
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Clearly specified
Newbie friendliness
52/100

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