mne-tools / mne-tools/mne-python
trial-dependent baseline
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Description
Hi,
Current implementation of epochs.apply_baseline(..) is useful for data analysis in respect to stimulus onset. For analyzing data in respect to reaction times it would be useful to define an individual baseline for each trial/epoch.
For example, i have a reading task where i use (-500, 0) ms pre-stimulus as baseline and (-500, 1000) centered on the reaction time (in my case speech articulation) as the region of interest.
Is this possible with the current version of MNE? If not, do you consider adding this functionality?
Thanks,
Cristi
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing epochs.apply_baseline(..) and the reaction-time example in the issue. Establish whether the current API supports a distinct baseline and region of interest for each trial; if not, clarify the requested behavior and validation requirements before implementation.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100