microsoft / microsoft/Graphormer

About Visualization

Open
#195 1 comment 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
Python
Stars
2.5k
Forks
374
PR merge metrics
No merged PRs in 30d

Description

I am highly interested in the prediction of protein conformations within this project. I recently attempted the prediction of adenosine kinase and obtained a pdb file along with two npz format files. I wish to visualize these results as demonstrated on your website but am uncertain about which tools to use. Could you please provide information on the software and tools required for visualization and the steps involved? This assistance would be greatly appreciated. Thank you.

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

The issue names no repository file, test, or entry point; it only mentions PDB and NPZ outputs and visualization shown on the website. Start by locating that website example and identifying the tools and steps needed to visualize those files. Done means documenting a reproducible visualization workflow for the reported outputs.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
documentation
Issue type
Documentation
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.