matplotlib / matplotlib/ipympl
ipympl when jupyter and ipython kernel are in different conda environment
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Description
Hi,
Some context
I typically install the jupter notebook in a conda environment, and create a shortcut on the desktop to launch jupyter-notebook.exe (windows 10 64 bits). Then I create an ipython kernel with all dependencies I want to work with in an other environment, and I register this kernel-in-a-conda-environment with the command
ipython kernel install --user --name NameOfMyNewKernel
I find this workflow relatively clean because I can chose when I want to update either my kernel (bleeding edge or very old depending on this situation) independently from the notebook itself.
The problem
As far as I understand ipympl is really 2 packages.
- One is a python package called
ipymplthat must be installed together with youripythonkernel, because you need to writeimport ipymplin your notebook. - The other one is a javascript package (I supposed it is called also ipympl) that must be installed together with the jupyter notebook application. I don't know if the python package is required or not. You also need to make sure that the javascript package is registered as an extension (
jupyter nbextension enable --py --sys-prefix ipympl) by jupyter.
If this is documented somewhere it is well hidden ;-)
The workaround
I installed 2 times the ipympl package, one in my kernel environment, the other in the jpuyter environment. For the latter case, because the python package is also shipped in the ipympl conda package, matplotlib is installed but I think that is useless. With this, everyting works, I am able to see interactive plots in my notebook.
Before figuring out that I needed to install ipympl in the jupyter environment, I received weird error messages without really explaining what the problem was.
Proposal
- Document the problem. I suppose that this repository README coud explain this, but I suppose it should be also documented somewhere in matplotlib and/or jupyter documentation. I must admit I find the jupyter documentation really hard to navigate though.
- Split ipympl conda package in two: one that contains the python package and the other one containing the javascript package.
Thanks
Guide de contribution
Ouvrir le guide de contribution
Par où commencer
- Lisez l'issue en entier, puis le guide de contribution du projet.
- Signalez en commentaire que vous la prenez — cela évite que deux personnes fassent le même travail.
- Forkez le dépôt et travaillez sur une branche.
- Ouvrez une pull request qui référence le numéro de l'issue.
Piste de recherche
Commencez par examiner le README du dépôt ainsi que les commandes documentées de conda, Jupyter kernel et nbextension mentionnées dans l’issue. Clarifiez quelles parties de ipympl appartiennent à l’environnement du kernel et lesquelles appartiennent à l’environnement Jupyter, et documentez la configuration requise ainsi que les symptômes en cas d’échec. Évaluez également s’il est possible de diviser le paquet conda ; le travail sera considéré comme terminé lorsque le workflow avec des environnements séparés sera clairement expliqué.
Rédigé par le modèle d'indexation à partir du texte de l'issue.
Évaluation
- Stack technique
- jupyter-notebook
- Domaine
- documentation, tooling
- Type d'issue
- Documentation
- Difficulté
- 4/5
- Temps estimé
- 3-5 jours
- Activité
- À l'abandon
- Clarté
- Plutôt claire
- Accessibilité débutants
- 35/100