ivadomed / ivadomed/model-spinal-rootlets

Use SPiCiCAP dataset for future model training

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cervical rootlets future work good internship project
Dominant language
Python
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Forks
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Description

@sandrinebedard pointed me to the following open-access dataset containing T2w (0.4x0.4x0.8mm) images for 22 healthy subjects:

https://data.mendeley.com/datasets/n2k7zz2xyt/1

@sandrinebedard applied the [dorsal rootlets model](https://github.com/ivadomed/model-spinal-rootlets/releases/tag/r20240730) on this dataset and rootlets segmetnation works pretty well!

Idea: we could use this dataset to enrich our training split for future model training!

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by reviewing the SPiCiCAP dataset and the linked dorsal rootlets model release to understand the available T2w images and current segmentation results. Then identify how training data is organized in this repository and define how the 22 subjects would be added to a future training split. Done means the dataset integration and its effect on training are specified and reproducible.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
machine-learning
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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