Cannot cmake Open3D-ML with PyTorch & CUDA 11.3

Open

#571 opened on Nov 20, 2022 1 comment 0 reactions 0 assignees View on GitHub

build/install issue

Dominant language: Python
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Forks: 365
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Merged PRs (30d): 1

Description

### Checklist

- [X] I have searched for [similar issues](https://github.com/isl-org/Open3D-ML/issues).
- [X] I have tested with the [latest development wheel](http://www.open3d.org/docs/latest/getting_started.html#development-version-pip).
- [X] I have checked the [release documentation](http://www.open3d.org/docs/release/) and the [latest documentation](http://www.open3d.org/docs/latest/) (for `master` branch).

### Steps to reproduce the issue

I followed the instructions on http://www.open3d.org/docs/release/compilation.html#ubuntu-macos and http://www.open3d.org/docs/release/compilation.html#ml-module to build Open3D from source:
```
git clone https://github.com/isl-org/Open3D
cd Open3D
util/install_deps_ubuntu.sh
mkdir build
cd build
cmake -DBUILD_CUDA_MODULE=ON \
-DGLIBCXX_USE_CXX11_ABI=OFF \
-DBUILD_PYTORCH_OPS=ON \
-DBUNDLE_OPEN3D_ML=ON \
-DOPEN3D_ML_ROOT=https://github.com/isl-org/Open3D-ML.git \
-DPython3_ROOT=/home/rayne/anaconda3/envs/nf2/bin/python \
..

```
And the last sentence (cmake) introduce some errors.

### Error message

The content of `CMakeError.log` is shown below:

```
Performing C SOURCE FILE Test CMAKE_HAVE_LIBC_PTHREAD failed with the following output:
Change Dir: /home/rayne/code/NeuroFluid/Open3D/build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/make -f Makefile cmTC_ebb67/fast && /usr/bin/make -f CMakeFiles/cmTC_ebb67.dir/build.make CMakeFiles/cmTC_ebb67.dir/build
make[1]: 进入目录“/home/rayne/code/NeuroFluid/Open3D/build/CMakeFiles/CMakeTmp”
Building C object CMakeFiles/cmTC_ebb67.dir/src.c.o
/usr/bin/cc -DCMAKE_HAVE_LIBC_PTHREAD -fPIE -o CMakeFiles/cmTC_ebb67.dir/src.c.o -c /home/rayne/code/NeuroFluid/Open3D/build/CMakeFiles/CMakeTmp/src.c
Linking C executable cmTC_ebb67
/usr/local/bin/cmake -E cmake_link_script CMakeFiles/cmTC_ebb67.dir/link.txt --verbose=1
/usr/bin/cc CMakeFiles/cmTC_ebb67.dir/src.c.o -o cmTC_ebb67
/usr/bin/ld: CMakeFiles/cmTC_ebb67.dir/src.c.o: in function `main':
src.c:(.text+0x3e): undefined reference to `pthread_create'
/usr/bin/ld: src.c:(.text+0x4a): undefined reference to `pthread_detach'
/usr/bin/ld: src.c:(.text+0x56): undefined reference to `pthread_cancel'
/usr/bin/ld: src.c:(.text+0x67): undefined reference to `pthread_join'
collect2: error: ld returned 1 exit status
make[1]: *** [CMakeFiles/cmTC_ebb67.dir/build.make:99：cmTC_ebb67] 错误 1
make[1]: 离开目录“/home/rayne/code/NeuroFluid/Open3D/build/CMakeFiles/CMakeTmp”
make: *** [Makefile:127：cmTC_ebb67/fast] 错误 2

Source file was:
#include

static void* test_func(void* data)
{
return data;
}

int main(void)
{
pthread_t thread;
pthread_create(&thread, NULL, test_func, NULL);
pthread_detach(thread);
pthread_cancel(thread);
pthread_join(thread, NULL);
pthread_atfork(NULL, NULL, NULL);
pthread_exit(NULL);

return 0;
}

Compiling the CUDA compiler identification source file "CMakeCUDACompilerId.cu" failed.
Compiler: /usr/bin/nvcc
Build flags:
Id flags: --keep;--keep-dir;tmp;-gencode=arch=compute_86,code=sm_86 -v