Fish 16S microbiome reads
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Description
Contact details
laura.lardinois@mail.mcgill.ca
Dataset Title
Fish Microbiome 16S 2021-22
Describe your dataset and any specific challenges or blockers you have or anticipate.
I have several sets of fish skin and gut 16S microbiome datasets, which are paired with large metadata files on each individual. I'd like to start making these data compatible with the Darwin Core framework to be able to share them, and find ways to optimize our metadata collection and organization to be able to minimize the amount of data cleaning and re-formatting needed for future samples. Challenges: metadata needs ReadME file to explain site names and abbreviations, sheer volume of sequencing reads exceeds laptop memory.
Info about "raw" Data Files.
metadata: .csv file, raw reads = .fastq files (or .fastq gz - compressed)
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