[dataset]: Laurentian Great Lakes 'omics datasets
Open
Nobody has claimed this yet.
data help
Stale
workshop
- Dominant language
- Jupyter Notebook
- Stars
- 55
- Forks
- 24
- PR merge metrics
- No merged PRs in 30d
Description
Contact details
kiledal@umich.edu
Dataset Title
Lake Erie Harmful Algal bloom associated communities
Describe your dataset and any specific challenges or blockers you have or anticipate.
These datasets include metagenomic and/or 16S amplicon summary tables from Western Lake Erie samples. The main blockers I anticipate are getting the data formatted correctly (knowing what standards to use) and learning how to actually submit the data--particularly if there are programatic interfaces for submission.
Info about "raw" Data Files.
The raw data is currently in a series of tables describing the abundance of features (e.g. taxonomic ids) in samples, taxonomic information for features, and metadata about samples.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Assessment
This issue has not been assessed yet.