Could not run an app on the device

**Description:**

Since `@ionic/cli@6.16.0` I can't run an app on the device.
Switching back to `6.15.0` solves the issue.

Suspected commit: https://github.com/ionic-team/ionic-cli/commit/359cdec031f3c3484093e9fee65e06ef866cfd8b

**Steps to Reproduce:**

https://github.com/kamilchlebek/ionic-multi-issue
1. `npm install`
2. `npm run app1` - 💥
3. Switch back to `@ionic/cli@6.15.0`
4. `npm run app1` - ✅

**Output:**

Console output

```
npm info it worked if it ends with ok
npm verb cli [
npm verb cli '/Users/kamil/.nvm/versions/node/v14.18.1/bin/node',
npm verb cli '/Users/kamil/.nvm/versions/node/v14.18.1/bin/npm',
npm verb cli 'run',
npm verb cli 'app1',
npm verb cli '--verbose'
npm verb cli ]
npm info using npm@6.14.15
npm info using node@v14.18.1
npm verb run-script [ 'preapp1', 'app1', 'postapp1' ]
npm info lifecycle ionic-multi@0.0.1~preapp1: ionic-multi@0.0.1
npm info lifecycle ionic-multi@0.0.1~app1: ionic-multi@0.0.1

> ionic-multi@0.0.1 app1 /Users/kamil/work/tmp/ionic-multi
> ionic capacitor run ios --project=app1 --livereload --external

> npm i -E @capacitor/ios@latest
npm info it worked if it ends with ok
npm verb cli [
npm verb cli '/Users/kamil/.nvm/versions/node/v14.18.1/bin/node',
npm verb cli '/Users/kamil/.nvm/versions/node/v14.18.1/bin/npm',
npm verb cli 'i',
npm verb cli '-E',
npm verb cli '@capacitor/ios@latest'
npm verb cli ]
npm info using npm@6.14.15
npm info using node@v14.18.1
npm verb npm-session 02837900d3640a1e
npm http fetch GET 304 https://registry.npmjs.org/@capacitor%2fios 361ms (from cache)
npm timing stage:loadCurrentTree Completed in 402ms
npm timing stage:loadIdealTree:cloneCurrentTree Completed in 1ms
npm timing stage:loadIdealTree:loadShrinkwrap Completed in 3ms
npm timing stage:loadIdealTree:loadAllDepsIntoIdealTree Completed in 3ms
npm timing stage:loadIdealTree Completed in 8ms
npm timing stage:generateActionsToTake Completed in 5ms
npm verb correctMkdir /Users/kamil/.npm/_locks correctMkdir not in flight; initializing
npm verb lock using /Users/kamil/.npm/_locks/staging-5b7db5580e82009f.lock for /Users/kamil/work/tmp/ionic-multi/apps/app1/node_modules/.staging
npm timing action:extract Completed in 63ms
npm info lifecycle @capacitor/ios@3.3.2~preuninstall: @capacitor/ios@3.3.2
npm info lifecycle @capacitor/ios@3.3.2~uninstall: @capacitor/ios@3.3.2
npm verb unbuild rmStuff @capacitor/ios@3.3.2 from /Users/kamil/work/tmp/ionic-multi/apps/app1/node_modules
npm info lifecycle @capacitor/ios@3.3.2~postuninstall: @capacitor/ios@3.3.2
npm timing action:unbuild Completed in 1ms
npm timing action:remove Completed in 18ms
npm timing action:finalize Completed in 2ms
npm timing action:refresh-package-json Completed in 4ms
npm info lifecycle @capacitor/ios@3.3.2~preinstall: @capacitor/ios@3.3.2
npm timing action:preinstall Completed in 1ms
npm info linkStuff @capacitor/ios@3.3.2
npm timing action:build Completed in 1ms
npm info lifecycle @capacitor/ios@3.3.2~install: @capacitor/ios@3.3.2
npm timing action:install Completed in 0ms
npm info lifecycle @capacitor/ios@3.3.2~postinstall: @capacitor/ios@3.3.2
npm timing action:postinstall Completed in 1ms
npm verb unlock done using /Users/kamil/.npm/_locks/staging-5b7db5580e82009f.lock for /Users/kamil/work/tmp/ionic-multi/apps/app1/node_modules/.staging
npm timing stage:executeActions Completed in 100ms
npm timing stage:rollbackFailedOptional Completed in 0ms
npm timing stage:runTopLevelLifecycles Completed in 517ms
npm verb saving [ { name: '@capacitor/ios', spec: '3.3.2', save: 'dependencies' } ]
npm verb shrinkwrap skipping write for package.json because there were no changes.
npm info lifecycle undefined~preshrinkwrap: undefined
npm info lifecycle app1~shrinkwrap: app1
npm verb shrinkwrap skipping write for package-lock.json because there were no changes.
npm info lifecycle app1~postshrinkwrap: app1
npm WARN @capacitor/ios@3.3.2 requires a peer of @capacitor/core@^3.3.0 but none is installed. You must install peer dependencies yourself.
npm WARN app1@ No description
npm WARN app1@ No repository field.
npm WARN app1@ No license field.

npm timing audit submit Completed in 268ms
npm http fetch POST 200 https://registry.npmjs.org/-/npm/v1/security/audits/quick 268ms
npm timing audit body Completed in 0ms
+ @capacitor/ios@3.3.2
updated 1 package and audited 1 package in 0.689s
found 0 vulnerabilities

npm verb exit [ 0, true ]
npm timing npm Completed in 948ms
npm info ok
> capacitor add ios
[capacitor] [error] ios platform already exists.
[capacitor] To re-add this platform, first remove ./ios, then run this command again.
[capacitor] WARNING: Your native project will be completely removed.
[ERROR] An error occurred while running subprocess capacitor.

capacitor add ios exited with exit code 1.
```

**My `ionic info`:**

```
Ionic:

Ionic CLI : 6.18.1
Ionic Framework : @ionic/angular 5.9.1
@angular-devkit/build-angular : 12.1.4
@angular-devkit/schematics : 12.1.4
@angular/cli : 12.1.4
@ionic/angular-toolkit : 4.0.0

Capacitor:

Capacitor CLI : 3.3.2
@capacitor/android : not installed
@capacitor/core : 3.3.2
@capacitor/ios : 3.3.2

Utility:

cordova-res : not installed globally
native-run : 1.5.0

System:

NodeJS : v14.18.1
npm : 6.14.15
OS : macOS Monterey
```