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iobis

17 indexed repositories · View on GitHub

robis
R client for the OBIS API

R · 48 stars
pyobis
OBIS Python client

Jupyter Notebook · 24 stars
speciesgrids
A Python package builds gridded datasets of WoRMS aligned marine species distributions as GeoParquet based on the OBIS and GBIF occurrenc...

Svelte · 8 stars
manual
The OBIS manual

Jupyter Notebook · 6 stars
mpaeu_map_platform
A platform for hosting SDM maps produced by OBIS

HTML · 5 stars
eov-data-management

CSS · 1 star
mapper
Mapper prototype

JavaScript · 1 star
eov-metadata-app-front-entries
Repo for generating JSON-LD metadata files for BioEco EOV data

Python · 1 star
training
OBIS training materials

R · 0 stars
edna-reference-databases

Python · 0 stars
obis-products-catalog
A CKAN catalog of products built on OBIS-mediated data.

HTML · 0 stars
aphia-sync
Synchrononizes changes in WoRMS to the OBIS database.

Python · 0 stars
edna-pipelines

Python · 0 stars
bioeco-portal

Python · 0 stars
obis-website
The OBIS website

HTML · 0 stars
edna-qc-app

Python · 0 stars
edna-sample-app

TypeScript · 0 stars

Beginner friendly Everything

Open All

Allow manual map location adjustment Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

iobis/edna-sample-app#11 · Opened Sep 15, 2026
Include VSEARCH hit accession numbers Open

iobis/edna-pipelines#5 · 1 comment · 1 assignee · Opened Sep 14, 2026
Images not syncing with error 400 Open

bug

iobis/edna-sample-app#9 · 1 assignee · Opened Sep 11, 2026
Avoid losing form data when switching tabs Open

bug

iobis/edna-sample-app#8 · 1 assignee · Opened Sep 11, 2026
Remove BioEco entry Test_Example Open

remove entry

Difficulty 1/5 Under an hour Newbie friendliness 88/100

iobis/eov-metadata-app-front-entries#70 · Opened Sep 4, 2026
BioEco Portal search by EEZ Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

iobis/bioeco-portal#20 · Opened Sep 4, 2026
Add the option to work with raw fastq files Open

Difficulty 4/5 3-5 days Newbie friendliness 48/100

iobis/edna-pipelines#4 · Opened Aug 26, 2026
Increase Node visibility Open

iobis/obis-website#400 · 1 comment · 1 assignee · Opened Aug 20, 2026
improve CG member list display Open

iobis/obis-website#397 · 1 assignee · Opened Aug 19, 2026
update link to OBIS Youtube channel Open

iobis/manual#124 · 1 assignee · Opened Aug 18, 2026
Handle control samples Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

iobis/edna-pipelines#2 · Opened Aug 16, 2026
Change title of the catalogue Open

bug

iobis/obis-products-catalog#62 · 1 assignee · Opened Aug 10, 2026
How to help users improve metadata? Open

iobis/obis-products-catalog#61 · 1 assignee · Opened Aug 9, 2026
Dataset card hover affordance Open

iobis/obis-website#394 · 1 assignee · Opened Aug 7, 2026
orphaned page: `/data/contribute` Open

iobis/obis-website#393 · 1 assignee · Opened Aug 7, 2026
remove `sanitize.R` from build Open

enhancement

iobis/manual#123 · 1 assignee · Opened Jul 28, 2026
add global ecosystem graphic to governance page Open

iobis/obis-website#359 · 4 comments · 2 assignees · Opened Jul 28, 2026
multi-languages Open

iobis/manual#122 · 1 assignee · Opened Jul 27, 2026
clicking on links unrelated to the dataset makes new tab Open

iobis/obis-website#358 · 1 assignee · Opened Jul 24, 2026
dataset landing page - clickable number summaries Open

iobis/obis-website#357 · 1 assignee · Opened Jul 24, 2026
improve explore occurrence table Open

iobis/obis-website#356 · 1 assignee · Opened Jul 24, 2026
Dataset landing page - list publisher Open

iobis/obis-website#355 · 1 assignee · Opened Jul 24, 2026
Some <p> in the description of the datasets in OBIS page. Open

Difficulty 2/5 1-3 hours Newbie friendliness 55/100

iobis/obis-website#354 · 1 reaction · Opened Jul 24, 2026
Dataset landing page show doi Open

iobis/obis-website#353 · 1 reaction · 1 assignee · Opened Jul 24, 2026
node dataset landing page - datasets by date Open

Difficulty 3/5 1-2 days Newbie friendliness 55/100

iobis/obis-website#323 · 1 reaction · Opened Jul 3, 2026
review mammals, turtles, seabirds programs Open

Difficulty 4/5 3-5 days Newbie friendliness 45/100

iobis/bioeco-portal#19 · Opened Jul 1, 2026
improve map colour legend Open

bug enhancement

Difficulty 4/5 3-5 days Newbie friendliness 48/100

iobis/bioeco-portal#18 · 1 comment · Opened Jul 1, 2026
BioEco Update: Gulf_of_Maine_North_Atlantic_Time_Series Open

metadata submission

Difficulty 2/5 1-3 hours Newbie friendliness 62/100

iobis/eov-metadata-app-front-entries#67 · Opened Jun 18, 2026
New Submission: MBON Pole to Pole Open

metadata submission

Difficulty 2/5 1-3 hours Newbie friendliness 55/100

iobis/eov-metadata-app-front-entries#66 · Opened May 29, 2026
create iobis template repository Open

Difficulty 2/5 Half a day Newbie friendliness 72/100

iobis/obis-products-catalog#60 · Opened May 29, 2026
Refresh whitelist Open

Difficulty 4/5 3-5 days Newbie friendliness 42/100

iobis/obis-products-catalog#59 · Opened May 29, 2026
New Submission: PELD-ILOC Open

metadata submission

Difficulty 2/5 1-3 hours Newbie friendliness 35/100

iobis/eov-metadata-app-front-entries#65 · Opened May 20, 2026
New Submission: Test Example Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

iobis/eov-metadata-app-front-entries#64 · 1 comment · Opened May 20, 2026
New Submission: Seagrass assessment in the Central Coast of Venezuela Open

metadata submission

Difficulty 2/5 1-3 hours Newbie friendliness 65/100

iobis/eov-metadata-app-front-entries#63 · Opened May 20, 2026
New Submission: Rocky shore biodiversity assessment in Ocumare de la Costa, Venezuela Open

metadata submission

Difficulty 2/5 1-3 hours Newbie friendliness 55/100

iobis/eov-metadata-app-front-entries#62 · 1 comment · Opened May 20, 2026
New Submission: Rocky shore biodiversity assessment in Ocumare de la Costa, Venezuela Open

metadata submission

Difficulty 1/5 Under an hour Newbie friendliness 35/100

iobis/eov-metadata-app-front-entries#60 · Opened May 20, 2026
New Submission: Australian continuous plankton recorder survey (AusCPR) Open

metadata submission

Difficulty 3/5 1-2 days Newbie friendliness 48/100

iobis/eov-metadata-app-front-entries#59 · Opened May 18, 2026
improve documentation: how to recreate prepared data Open

Difficulty 4/5 3-5 days Newbie friendliness 45/100

iobis/speciesgrids#9 · 1 comment · Opened May 14, 2026
add documentation of parquet fields Open

iobis/speciesgrids#8 · 1 comment · 1 assignee · Opened May 14, 2026
Visualise links between projects, OBIS workplan, and strategies Open

iobis/obis-website#307 · 3 assignees · Opened May 14, 2026
OBIS 2030 Open

iobis/obis-website#306 · 1 assignee · Opened May 14, 2026
Full scientific name Open

iobis/speciesgrids#7 · 1 assignee · Opened May 11, 2026
NO_MATCH flags in OBIS dataset for taxa that are in WoRMS Open

iobis/aphia-sync#5 · 1 comment · 1 assignee · Opened May 7, 2026
Add number of occurrences to Taxon view Open

enhancement taxon page

Difficulty 2/5 1-3 hours Newbie friendliness 72/100

iobis/obis-website#289 · Opened Apr 29, 2026
Quarto patch for inclusion of Tutorials and Notebooks Open

iobis/manual#115 · 3 comments · 3 assignees · Opened Apr 24, 2026
fix toc Open

Difficulty 2/5 1-3 hours Newbie friendliness 25/100

iobis/eov-data-management#1 · Opened Apr 22, 2026
Publishers x Country view should be sortable Open

Difficulty 2/5 1-3 hours Newbie friendliness 68/100

iobis/obis-website#283 · Opened Apr 14, 2026
create Event landing pages Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

iobis/obis-website#279 · 1 comment · Opened Apr 7, 2026
Distinguish source fields from curator-annotated fields in DOI re-import Open

Difficulty 4/5 3-5 days Newbie friendliness 48/100

iobis/obis-products-catalog#47 · Opened Apr 3, 2026
Suggest alternatives Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

iobis/edna-qc-app#4 · Opened Apr 2, 2026

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