int-brain-lab / int-brain-lab/iblscripts
include tile plot in DLC pipeline
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Description
another point: it would be great to have a tile plot of video data for each lab in DJ website (or somewhere easily accessible to each) updated daily to check mouse positioning.
@Michael Schartner already did the coding for it: https://github.com/int-brain-lab/iblvideo/blob/master/IBL_video_tile_plot.py
However it currently requires one to download the relevant video data and run the tile script…
Could we have it automatically done, or is that too big of a job ?
Gaëlle
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reading IBL_video_tile_plot.py, then determine how the DLC pipeline can obtain the relevant video data without manual downloading. The work is done when a tile plot for each lab is generated daily and made accessible through the DJ website or another agreed location.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data, devops
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 25/100