imodpasteur / imodpasteur/ANNA-PALM

Support training with .smlm file

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Dominant language
Python
Stars
54
Forks
14
PR merge metrics
No merged PRs in 30d

Description

A new file format with .smlm extension is introduced to reduce the file size of the localization table. It's now the native format on our annapalm.pasteur.fr website.

Support training with .smlm file format would allow users to use data downloaded from the website directly.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No files, tests, or entry points are named in the issue. Start by locating the training data-loading path and checking how existing localization table formats are parsed; done means training accepts the .smlm files downloaded from annapalm.pasteur.fr without requiring conversion.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
machine-learning
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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