idem-lab / idem-lab/epiwave.params

wrapper for literature/known incubation periods for other infections

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Dominant language
R
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Description

Currently incubation period distributions are created by make_cdf. We want to allow for other diseases with other strains/covariants.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading the existing make_cdf implementation and the surrounding code that creates incubation-period distributions. Clarify the expected wrapper interface and how diseases, strains, or covariants are represented before making changes. Done means other infection distributions can be created through the proposed wrapper, with behavior checked against the existing make_cdf approach.

Written by the indexing model from the issue text.

Assessment

Tech stack
r
Domain
data
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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