higlass / higlass/higlass-python
HiGlass 1.3.4 not showing maps in Jupyter
- Dominant language
- Python
- Stars
- 66
- Forks
- 11
- PR merge metrics
- No merged PRs in 30d
Description
Hello,
I didn't manage to make the last version of HiGlass (1.3.4) work to display interaction maps interactively in a Jupyter Notebook. I created a Python virtual environment and installed ipykernel 7.0.1. When running the command `view`, I got the following message:
[Open Browser Console for more detailed log - Double click to close this message]
Failed to load model class 'AnyModel' from module 'anywidget'
I then downgraded to HiGlass 1.3.3 and it seemed to work fine, but I figured I should report it in case someone else comes across the same issue.
Thanks!
Contributor guide
Research direction
Reproduce the `view` command in a Jupyter environment using HiGlass 1.3.4 and ipykernel 7.0.1, then inspect the browser-console error about `AnyModel` from `anywidget`. Compare the same notebook with HiGlass 1.3.3 and determine what changed; done means interactive maps load successfully on the affected version.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook, python
- Domain
- data-visualization
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100