ga4gh / ga4gh/vrs-python

Extend translator methods

Open
#95 3 comments 0 reactions 1 assignee Claimed by @korikuzma View on GitHub
enhancement Stale-exempt VRS translator
Dominant language
Python
Stars
62
Forks
42
Avg merge
1h 2m
Merged PRs (30d)
1

Description

The current translator methods can only return Alleles with Literal Sequence Expressions. There is plenty of work in the [Variation Normalizer](https://github.com/cancervariants/variation-normalization) for representing HGVS expressions as Alleles that aren't bound to a Literal Sequence Expression state. It can also represent HGVS expressions as Relative and Absolute Copy Number variation. I'd like to move over this work in Variation Normalizer to vrs-python. For expressions that require some inference to be made, I plan on creating a new class(es).

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.