ga4gh / ga4gh/vrs-python

Update to `pysam>=0.24.0`

Open Beginner friendly
#653 0 comments 2 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
62
Forks
42
Avg merge
1h 2m
Merged PRs (30d)
1

Description

This bug with pytest cov was resolved in `0.24.0`
https://github.com/ga4gh/vrs-python/issues/560
https://github.com/pysam-developers/pysam/releases/tag/v0.24.0

Contributor guide

No contributing guide indexed for this repository

Research direction

Find the project's dependency declaration and check how pysam is currently constrained. Update the requirement to pysam>=0.24.0, then run the existing test suite with pytest-cov to confirm the reported bug no longer occurs.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics
Issue type
Bug
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Active
Clarity
Mostly clear
Newbie friendliness
68/100

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