Support to_hgvs for protein variants
Open
enhancement
priority:low
- Dominant language
- Python
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- 62
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- 42
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Description
Example:
https://www.ncbi.nlm.nih.gov/clinvar/variation/2274894
```yaml
id: ga4gh:VA.AIm-GH_iqp_bpcIVzi431fl7z-cQimNN
type: Allele
digest: AIm-GH_iqp_bpcIVzi431fl7z-cQimNN
location:
id: ga4gh:SL.wgFs8Z2Nk4uD7nq_gFbdYH1FhagXkMhL
type: SequenceLocation
digest: wgFs8Z2Nk4uD7nq_gFbdYH1FhagXkMhL
sequenceReference:
type: SequenceReference
refgetAccession: SQ.dvlWjX2CGulwfb2ehmkCFn02ah7tEEVB
start: 260
end: 261
state:
type: LiteralSequenceExpression
sequence: A
```
Should come out as `NP_060204.1:p.Val261Ala`.
For now only support this for single-protein-residue changes.
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