Translator should support HGVS splice variants
- Dominant language
- Python
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Description
## Feature Request
In #602 , we are pulling in VRS schema changes that support intron positions. This issue will add support for the translation of splice variants represented as HGVS expressions. https://github.com/ga4gh/vrs/pull/679 provides examples on how to represent HGVS splice variants as VRS Relative Alleles.
Note: We will either update the current `AlleleTranslator` to support both VRS Allele and VRS RelativeAllele, or will create a new translator specifically for VRS RelativeAllele (`RelativeAlleleTranslator`).
## Acceptance Critera
Given I have an HGVS splice variant (such as `NM_005188.4(CBL):c.1096-1G>C`),
When I run `translate_from(hgvs_splice_variant_str)`,
Then I should get the VRS `RelativeAllele` normalized representation (not sure if there will be a specific RelativeAllele normalization algorithm we'll follow).
(Once the above VRS PR is merged, use examples from that)
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