ga4gh / ga4gh/htsget-refserver
POST request should merge regions and deduplicate reads
Open
Nobody has claimed this yet.
- Dominant language
- Go
- Stars
- 12
- Forks
- 4
- PR merge metrics
- No merged PRs in 30d
Description
When serving the result of a POST request, the server should merge adjacent/overlapping regions and deduplicate reads that are overlapped by or contained inside multiple regions specified in the request.
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
No files or tests are named. Start by locating the POST request handler and the code that processes requested regions and reads. Done means adjacent or overlapping regions are merged and reads covered by multiple regions are returned only once.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- go
- Domain
- api, backend
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100