ga4gh / ga4gh/fasp-scripts

Add Bulk-FHIR Connectathon examples to Jupyter Notebook

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FASPHackathon2 search
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Jupyter Notebook
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Description

Jonathan worked up the Search examples in the attachment from queries Brian Walsh had done as
https://colab.research.google.com/drive/1HhEEB3MJ8LbMP2ta946s8OARPc5RflHu?usp=sharing#scrollTo=nM-GHd3IWeqF

Jonathan wrote
> A Search implementation with an appropriate connection to FHIR could take care of everything before "Clinical / Care Management Example Query" step, leaving just the interesting query parts up to the data consumer. Those queries were written for sqlite. Here's the same query adapted to PrestoSQL (now Trino), with table name and filters adjusted so it returns some rows from the kidsfirst FHIR data at http://ga4gh-search-adapter-presto-public.staging.dnastack.com/search:

These would be useful to have in a Jupyter notebook. Have attached the queries Jonathan created as an attachment.

[fhir_query_examples.txt](https://github.com/ga4gh/fasp-scripts/files/5889343/fhir_query_examples.txt)

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